Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.54■□□□□ 0.4
CAPNS1P04632 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.54■□□□□ 0.4
CAPNS1P04632 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CAPNS1P04632 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.54■□□□□ 0.4
CAPNS1P04632 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.54■□□□□ 0.4
CAPNS1P04632 AC010240.3-201ENST00000607688 395 ntBASIC17.54■□□□□ 0.4
CAPNS1P04632 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.54■□□□□ 0.4
CAPNS1P04632 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.54■□□□□ 0.4
CAPNS1P04632 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.54■□□□□ 0.4
CAPNS1P04632 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CAPNS1P04632 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CAPNS1P04632 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPNS1P04632 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.54■□□□□ 0.4
CAPNS1P04632 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPNS1P04632 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPNS1P04632 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPNS1P04632 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
CAPNS1P04632 AC104109.2-201ENST00000602919 1418 ntBASIC17.54■□□□□ 0.4
CAPNS1P04632 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.54■□□□□ 0.4
CAPNS1P04632 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CAPNS1P04632 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPNS1P04632 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPNS1P04632 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.53■□□□□ 0.4
CAPNS1P04632 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CAPNS1P04632 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPNS1P04632 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPNS1P04632 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPNS1P04632 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPNS1P04632 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPNS1P04632 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
CAPNS1P04632 FLJ13224-201ENST00000313737 1514 ntBASIC17.53■□□□□ 0.4
CAPNS1P04632 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPNS1P04632 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPNS1P04632 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CAPNS1P04632 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.53■□□□□ 0.4
CAPNS1P04632 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.53■□□□□ 0.4
CAPNS1P04632 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPNS1P04632 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.53■□□□□ 0.4
CAPNS1P04632 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPNS1P04632 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPNS1P04632 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CAPNS1P04632 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPNS1P04632 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CAPNS1P04632 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.53■□□□□ 0.4
CAPNS1P04632 SART3-203ENST00000546611 1184 ntBASIC17.53■□□□□ 0.4
CAPNS1P04632 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.53■□□□□ 0.4
CAPNS1P04632 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPNS1P04632 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPNS1P04632 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.53■□□□□ 0.4
CAPNS1P04632 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPNS1P04632 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPNS1P04632 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CAPNS1P04632 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPNS1P04632 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.53■□□□□ 0.4
CAPNS1P04632 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPNS1P04632 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPNS1P04632 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CAPNS1P04632 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CAPNS1P04632 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CAPNS1P04632 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.52■□□□□ 0.4
CAPNS1P04632 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPNS1P04632 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPNS1P04632 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.52■□□□□ 0.4
CAPNS1P04632 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
CAPNS1P04632 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPNS1P04632 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CAPNS1P04632 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPNS1P04632 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CAPNS1P04632 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPNS1P04632 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPNS1P04632 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.52■□□□□ 0.4
CAPNS1P04632 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CAPNS1P04632 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
CAPNS1P04632 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPNS1P04632 MED15P5-201ENST00000423150 992 ntBASIC17.52■□□□□ 0.4
CAPNS1P04632 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPNS1P04632 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CAPNS1P04632 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.52■□□□□ 0.4
CAPNS1P04632 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPNS1P04632 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CAPNS1P04632 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.52■□□□□ 0.4
CAPNS1P04632 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPNS1P04632 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPNS1P04632 KRT8P7-201ENST00000533003 1432 ntBASIC17.52■□□□□ 0.4
CAPNS1P04632 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CAPNS1P04632 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CAPNS1P04632 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CAPNS1P04632 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CAPNS1P04632 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
CAPNS1P04632 MTMR9LP-203ENST00000426597 1545 ntBASIC17.52■□□□□ 0.39
CAPNS1P04632 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CAPNS1P04632 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CAPNS1P04632 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CAPNS1P04632 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.52■□□□□ 0.39
CAPNS1P04632 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CAPNS1P04632 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CAPNS1P04632 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CAPNS1P04632 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.51■□□□□ 0.39
CAPNS1P04632 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPNS1P04632 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms