Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P04436 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P04436 AC079776.2-201ENST00000641154 1609 ntBASIC16.09■□□□□ 0.17
P04436 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P04436 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.09■□□□□ 0.17
P04436 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
P04436 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.09■□□□□ 0.17
P04436 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.09■□□□□ 0.17
P04436 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.09■□□□□ 0.17
P04436 AC021087.4-201ENST00000563761 564 ntBASIC16.09■□□□□ 0.17
P04436 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
P04436 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
P04436 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.09■□□□□ 0.17
P04436 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P04436 AL354751.1-201ENST00000412768 1863 ntBASIC16.09■□□□□ 0.17
P04436 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
P04436 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
P04436 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.09■□□□□ 0.17
P04436 AL353593.2-201ENST00000602529 1483 ntBASIC16.09■□□□□ 0.17
P04436 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
P04436 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
P04436 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
P04436 AL049757.1-201ENST00000616842 1596 ntBASIC16.09■□□□□ 0.17
P04436 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.09■□□□□ 0.17
P04436 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.08■□□□□ 0.17
P04436 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.08■□□□□ 0.17
P04436 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
P04436 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
P04436 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
P04436 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
P04436 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
P04436 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
P04436 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
P04436 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
P04436 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
P04436 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P04436 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P04436 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
P04436 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
P04436 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.08■□□□□ 0.16
P04436 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
P04436 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
P04436 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P04436 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
P04436 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
P04436 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P04436 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
P04436 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
P04436 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P04436 KLF4P1-201ENST00000412782 1185 ntBASIC16.08■□□□□ 0.16
P04436 AL020989.1-201ENST00000422979 469 ntBASIC16.08■□□□□ 0.16
P04436 AC018712.1-201ENST00000455767 687 ntBASIC16.08■□□□□ 0.16
P04436 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
P04436 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.08■□□□□ 0.16
P04436 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.08■□□□□ 0.16
P04436 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.08■□□□□ 0.16
P04436 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
P04436 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.08■□□□□ 0.16
P04436 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.08■□□□□ 0.16
P04436 MTDHP4-201ENST00000600287 670 ntBASIC16.08■□□□□ 0.16
P04436 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
P04436 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.08■□□□□ 0.16
P04436 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
P04436 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P04436 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
P04436 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
P04436 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P04436 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P04436 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
P04436 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
P04436 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
P04436 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.07■□□□□ 0.16
P04436 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.07■□□□□ 0.16
P04436 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
P04436 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P04436 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P04436 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P04436 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P04436 AC003669.1-201ENST00000334569 611 ntBASIC16.07■□□□□ 0.16
P04436 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
P04436 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P04436 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.07■□□□□ 0.16
P04436 MYCLP1-201ENST00000372451 1075 ntBASIC16.07■□□□□ 0.16
P04436 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
P04436 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
P04436 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
P04436 SPDYE21P-201ENST00000413323 827 ntBASIC16.07■□□□□ 0.16
P04436 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.07■□□□□ 0.16
P04436 BX005266.1-201ENST00000473402 457 ntBASIC16.07■□□□□ 0.16
P04436 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
P04436 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.07■□□□□ 0.16
P04436 OR7E14P-202ENST00000530490 1290 ntBASIC16.07■□□□□ 0.16
P04436 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.07■□□□□ 0.16
P04436 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.07■□□□□ 0.16
P04436 AC148477.8-201ENST00000624298 468 ntBASIC16.07■□□□□ 0.16
P04436 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.07■□□□□ 0.16
P04436 AL022326.1-202ENST00000641533 845 ntBASIC16.07■□□□□ 0.16
P04436 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
P04436 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.07■□□□□ 0.16
P04436 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms