Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 GGTLC5P-201ENST00000617623 998 ntBASIC10.86□□□□□ -0.67
APOBP04114 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOBP04114 AC009336.1-201ENST00000608941 1553 ntBASIC10.86□□□□□ -0.67
APOBP04114 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOBP04114 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC10.86□□□□□ -0.67
APOBP04114 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOBP04114 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
APOBP04114 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOBP04114 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
APOBP04114 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
APOBP04114 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC10.86□□□□□ -0.67
APOBP04114 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOBP04114 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC10.86□□□□□ -0.67
APOBP04114 AC103564.2-201ENST00000432853 1299 ntBASIC10.86□□□□□ -0.67
APOBP04114 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC10.86□□□□□ -0.67
APOBP04114 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
APOBP04114 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC10.86□□□□□ -0.67
APOBP04114 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
APOBP04114 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
APOBP04114 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
APOBP04114 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOBP04114 FLYWCH1P1-201ENST00000460917 1874 ntBASIC10.86□□□□□ -0.67
APOBP04114 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
APOBP04114 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
APOBP04114 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOBP04114 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOBP04114 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC10.86□□□□□ -0.67
APOBP04114 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOBP04114 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
APOBP04114 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC10.86□□□□□ -0.67
APOBP04114 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC10.86□□□□□ -0.67
APOBP04114 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
APOBP04114 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOBP04114 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC10.86□□□□□ -0.67
APOBP04114 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
APOBP04114 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC10.86□□□□□ -0.67
APOBP04114 AL590787.1-201ENST00000568856 1315 ntBASIC10.86□□□□□ -0.67
APOBP04114 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
APOBP04114 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC10.85□□□□□ -0.67
APOBP04114 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC10.85□□□□□ -0.67
APOBP04114 AL671277.1-201ENST00000429656 993 ntBASIC10.85□□□□□ -0.67
APOBP04114 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
APOBP04114 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC10.85□□□□□ -0.67
APOBP04114 AC079140.1-201ENST00000508039 487 ntBASIC10.85□□□□□ -0.67
APOBP04114 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC10.85□□□□□ -0.67
APOBP04114 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
APOBP04114 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
APOBP04114 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOBP04114 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOBP04114 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
APOBP04114 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOBP04114 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOBP04114 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOBP04114 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
APOBP04114 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOBP04114 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC10.85□□□□□ -0.67
APOBP04114 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
APOBP04114 RARRES2P8-201ENST00000566335 367 ntBASIC10.85□□□□□ -0.67
APOBP04114 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOBP04114 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
APOBP04114 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
APOBP04114 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC10.85□□□□□ -0.67
APOBP04114 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOBP04114 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
APOBP04114 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOBP04114 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOBP04114 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
APOBP04114 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOBP04114 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
APOBP04114 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC10.85□□□□□ -0.67
APOBP04114 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC10.85□□□□□ -0.67
APOBP04114 COQ6-210ENST00000554920 649 ntTSL 3 BASIC10.85□□□□□ -0.67
APOBP04114 MIR4525-201ENST00000580000 75 ntBASIC10.85□□□□□ -0.67
APOBP04114 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC10.85□□□□□ -0.67
APOBP04114 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
APOBP04114 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC10.85□□□□□ -0.67
APOBP04114 UXT-AS1-201ENST00000590504 1525 ntBASIC10.85□□□□□ -0.67
APOBP04114 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC10.85□□□□□ -0.67
APOBP04114 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
APOBP04114 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOBP04114 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC10.85□□□□□ -0.67
APOBP04114 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOBP04114 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC10.85□□□□□ -0.67
APOBP04114 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
APOBP04114 HMGA1P7-201ENST00000406908 502 ntBASIC10.85□□□□□ -0.67
APOBP04114 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC10.85□□□□□ -0.67
APOBP04114 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC10.85□□□□□ -0.67
APOBP04114 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
APOBP04114 KRT8P23-201ENST00000560090 1207 ntBASIC10.85□□□□□ -0.67
APOBP04114 AC009407.1-201ENST00000568958 598 ntBASIC10.85□□□□□ -0.67
APOBP04114 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC10.85□□□□□ -0.67
APOBP04114 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC10.85□□□□□ -0.67
APOBP04114 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC10.85□□□□□ -0.67
APOBP04114 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
APOBP04114 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOBP04114 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
APOBP04114 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC10.84□□□□□ -0.67
APOBP04114 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
APOBP04114 DGCR5-201ENST00000399539 862 ntBASIC10.84□□□□□ -0.67
APOBP04114 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms