Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
KRT6AP02538 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT6AP02538 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.1■□□□□ 0.33
KRT6AP02538 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.1■□□□□ 0.33
KRT6AP02538 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT6AP02538 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT6AP02538 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
KRT6AP02538 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.1■□□□□ 0.33
KRT6AP02538 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
KRT6AP02538 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
KRT6AP02538 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT6AP02538 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT6AP02538 TNRC18P3-201ENST00000441896 2691 ntBASIC17.09■□□□□ 0.33
KRT6AP02538 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT6AP02538 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT6AP02538 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT6AP02538 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT6AP02538 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
KRT6AP02538 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
KRT6AP02538 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
KRT6AP02538 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.09■□□□□ 0.33
KRT6AP02538 AC068472.1-201ENST00000474589 881 ntBASIC17.09■□□□□ 0.33
KRT6AP02538 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.09■□□□□ 0.33
KRT6AP02538 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.09■□□□□ 0.33
KRT6AP02538 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT6AP02538 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.09■□□□□ 0.33
KRT6AP02538 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.09■□□□□ 0.33
KRT6AP02538 AC005332.3-201ENST00000589904 676 ntBASIC17.09■□□□□ 0.33
KRT6AP02538 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT6AP02538 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT6AP02538 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT6AP02538 LINC01311-201ENST00000565162 1445 ntBASIC17.09■□□□□ 0.33
KRT6AP02538 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT6AP02538 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.09■□□□□ 0.33
KRT6AP02538 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT6AP02538 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.09■□□□□ 0.33
KRT6AP02538 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT6AP02538 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT6AP02538 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT6AP02538 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT6AP02538 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT6AP02538 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
KRT6AP02538 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.09■□□□□ 0.33
KRT6AP02538 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT6AP02538 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT6AP02538 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.09■□□□□ 0.33
KRT6AP02538 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
KRT6AP02538 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
KRT6AP02538 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
KRT6AP02538 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
KRT6AP02538 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
KRT6AP02538 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
KRT6AP02538 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.08■□□□□ 0.33
KRT6AP02538 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.08■□□□□ 0.33
KRT6AP02538 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
KRT6AP02538 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KRT6AP02538 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
KRT6AP02538 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
KRT6AP02538 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KRT6AP02538 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.08■□□□□ 0.33
KRT6AP02538 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.08■□□□□ 0.33
KRT6AP02538 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
KRT6AP02538 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.08■□□□□ 0.32
KRT6AP02538 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT6AP02538 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
KRT6AP02538 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.08■□□□□ 0.32
KRT6AP02538 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.08■□□□□ 0.32
KRT6AP02538 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT6AP02538 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KRT6AP02538 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT6AP02538 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KRT6AP02538 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.08■□□□□ 0.32
KRT6AP02538 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KRT6AP02538 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.08■□□□□ 0.32
KRT6AP02538 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
KRT6AP02538 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.08■□□□□ 0.32
KRT6AP02538 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT6AP02538 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT6AP02538 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KRT6AP02538 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT6AP02538 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
KRT6AP02538 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.08■□□□□ 0.32
KRT6AP02538 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT6AP02538 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT6AP02538 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT6AP02538 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT6AP02538 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT6AP02538 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.07■□□□□ 0.32
KRT6AP02538 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT6AP02538 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT6AP02538 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT6AP02538 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT6AP02538 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT6AP02538 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
KRT6AP02538 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
KRT6AP02538 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT6AP02538 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
KRT6AP02538 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
KRT6AP02538 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT6AP02538 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms