Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NKX2-2O95096 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX2-2O95096 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX2-2O95096 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NKX2-2O95096 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX2-2O95096 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX2-2O95096 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NKX2-2O95096 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
NKX2-2O95096 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NKX2-2O95096 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NKX2-2O95096 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX2-2O95096 RCN1P2-201ENST00000398357 915 ntBASIC16.25■□□□□ 0.19
NKX2-2O95096 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NKX2-2O95096 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX2-2O95096 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NKX2-2O95096 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NKX2-2O95096 STK25P1-201ENST00000585406 838 ntBASIC16.25■□□□□ 0.19
NKX2-2O95096 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.25■□□□□ 0.19
NKX2-2O95096 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.25■□□□□ 0.19
NKX2-2O95096 AC114341.1-201ENST00000618070 349 ntBASIC16.25■□□□□ 0.19
NKX2-2O95096 AD001527.2-201ENST00000622994 785 ntBASIC16.25■□□□□ 0.19
NKX2-2O95096 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
NKX2-2O95096 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NKX2-2O95096 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NKX2-2O95096 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NKX2-2O95096 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
NKX2-2O95096 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX2-2O95096 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX2-2O95096 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.25■□□□□ 0.19
NKX2-2O95096 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
NKX2-2O95096 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NKX2-2O95096 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX2-2O95096 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NKX2-2O95096 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
NKX2-2O95096 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX2-2O95096 AC108860.2-201ENST00000562760 2183 ntBASIC16.24■□□□□ 0.19
NKX2-2O95096 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.24■□□□□ 0.19
NKX2-2O95096 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.24■□□□□ 0.19
NKX2-2O95096 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX2-2O95096 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.24■□□□□ 0.19
NKX2-2O95096 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX2-2O95096 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NKX2-2O95096 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX2-2O95096 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX2-2O95096 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX2-2O95096 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
NKX2-2O95096 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX2-2O95096 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
NKX2-2O95096 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.24■□□□□ 0.19
NKX2-2O95096 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.24■□□□□ 0.19
NKX2-2O95096 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.24■□□□□ 0.19
NKX2-2O95096 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX2-2O95096 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX2-2O95096 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.24■□□□□ 0.19
NKX2-2O95096 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.24■□□□□ 0.19
NKX2-2O95096 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX2-2O95096 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.24■□□□□ 0.19
NKX2-2O95096 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX2-2O95096 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX2-2O95096 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NKX2-2O95096 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX2-2O95096 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.24■□□□□ 0.19
NKX2-2O95096 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NKX2-2O95096 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.23■□□□□ 0.19
NKX2-2O95096 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX2-2O95096 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX2-2O95096 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX2-2O95096 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX2-2O95096 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.23■□□□□ 0.19
NKX2-2O95096 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.23■□□□□ 0.19
NKX2-2O95096 AC099336.1-202ENST00000602961 463 ntBASIC16.23■□□□□ 0.19
NKX2-2O95096 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.23■□□□□ 0.19
NKX2-2O95096 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.23■□□□□ 0.19
NKX2-2O95096 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.23■□□□□ 0.19
NKX2-2O95096 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NKX2-2O95096 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX2-2O95096 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX2-2O95096 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX2-2O95096 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NKX2-2O95096 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX2-2O95096 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.23■□□□□ 0.19
NKX2-2O95096 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX2-2O95096 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX2-2O95096 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.23■□□□□ 0.19
NKX2-2O95096 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.23■□□□□ 0.19
NKX2-2O95096 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX2-2O95096 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-2O95096 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-2O95096 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-2O95096 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-2O95096 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-2O95096 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NKX2-2O95096 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-2O95096 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-2O95096 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.22■□□□□ 0.19
NKX2-2O95096 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-2O95096 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-2O95096 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.22■□□□□ 0.19
NKX2-2O95096 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NKX2-2O95096 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms