Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CLSTN1O94985 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLSTN1O94985 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLSTN1O94985 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.53■□□□□ 0.72
CLSTN1O94985 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.53■□□□□ 0.72
CLSTN1O94985 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.53■□□□□ 0.72
CLSTN1O94985 AC004263.2-201ENST00000617183 678 ntBASIC19.53■□□□□ 0.72
CLSTN1O94985 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLSTN1O94985 AC093458.2-201ENST00000623150 629 ntBASIC19.53■□□□□ 0.72
CLSTN1O94985 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLSTN1O94985 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.53■□□□□ 0.72
CLSTN1O94985 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.53■□□□□ 0.72
CLSTN1O94985 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLSTN1O94985 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLSTN1O94985 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLSTN1O94985 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.53■□□□□ 0.72
CLSTN1O94985 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLSTN1O94985 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLSTN1O94985 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.52■□□□□ 0.72
CLSTN1O94985 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CLSTN1O94985 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLSTN1O94985 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.52■□□□□ 0.72
CLSTN1O94985 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CLSTN1O94985 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.52■□□□□ 0.72
CLSTN1O94985 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CLSTN1O94985 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLSTN1O94985 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLSTN1O94985 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLSTN1O94985 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CLSTN1O94985 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLSTN1O94985 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLSTN1O94985 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.52■□□□□ 0.72
CLSTN1O94985 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.52■□□□□ 0.72
CLSTN1O94985 AC005332.3-201ENST00000589904 676 ntBASIC19.52■□□□□ 0.72
CLSTN1O94985 GPR32P1-201ENST00000601788 811 ntBASIC19.52■□□□□ 0.72
CLSTN1O94985 AL358472.4-201ENST00000633140 710 ntBASIC19.52■□□□□ 0.72
CLSTN1O94985 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLSTN1O94985 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CLSTN1O94985 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLSTN1O94985 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLSTN1O94985 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLSTN1O94985 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.52■□□□□ 0.71
CLSTN1O94985 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CLSTN1O94985 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLSTN1O94985 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLSTN1O94985 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.52■□□□□ 0.71
CLSTN1O94985 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLSTN1O94985 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.51■□□□□ 0.71
CLSTN1O94985 AC005332.1-201ENST00000577698 1310 ntBASIC19.51■□□□□ 0.71
CLSTN1O94985 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLSTN1O94985 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLSTN1O94985 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLSTN1O94985 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.51■□□□□ 0.71
CLSTN1O94985 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLSTN1O94985 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CLSTN1O94985 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CLSTN1O94985 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CLSTN1O94985 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLSTN1O94985 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLSTN1O94985 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLSTN1O94985 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLSTN1O94985 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.51■□□□□ 0.71
CLSTN1O94985 TSPY12P-201ENST00000421279 868 ntBASIC19.51■□□□□ 0.71
CLSTN1O94985 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.51■□□□□ 0.71
CLSTN1O94985 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLSTN1O94985 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.51■□□□□ 0.71
CLSTN1O94985 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.51■□□□□ 0.71
CLSTN1O94985 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLSTN1O94985 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.51■□□□□ 0.71
CLSTN1O94985 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CLSTN1O94985 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLSTN1O94985 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLSTN1O94985 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLSTN1O94985 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLSTN1O94985 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.51■□□□□ 0.71
CLSTN1O94985 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLSTN1O94985 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLSTN1O94985 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CLSTN1O94985 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLSTN1O94985 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLSTN1O94985 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC19.51■□□□□ 0.71
CLSTN1O94985 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.51■□□□□ 0.71
CLSTN1O94985 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLSTN1O94985 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLSTN1O94985 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLSTN1O94985 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLSTN1O94985 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLSTN1O94985 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLSTN1O94985 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLSTN1O94985 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.51■□□□□ 0.71
CLSTN1O94985 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CLSTN1O94985 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLSTN1O94985 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLSTN1O94985 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLSTN1O94985 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLSTN1O94985 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CLSTN1O94985 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLSTN1O94985 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CLSTN1O94985 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLSTN1O94985 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms