Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCF11O94913 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PCF11O94913 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC27.23■■□□□ 1.95
PCF11O94913 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCF11O94913 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCF11O94913 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PCF11O94913 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC27.22■■□□□ 1.95
PCF11O94913 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCF11O94913 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC27.22■■□□□ 1.95
PCF11O94913 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC27.22■■□□□ 1.95
PCF11O94913 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC27.22■■□□□ 1.95
PCF11O94913 AC091812.2-201ENST00000619081 385 ntBASIC27.22■■□□□ 1.95
PCF11O94913 PODN-203ENST00000395871 2744 ntTSL 5 BASIC27.22■■□□□ 1.95
PCF11O94913 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCF11O94913 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC27.22■■□□□ 1.95
PCF11O94913 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC27.22■■□□□ 1.95
PCF11O94913 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCF11O94913 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
PCF11O94913 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
PCF11O94913 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
PCF11O94913 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC27.22■■□□□ 1.95
PCF11O94913 SLC25A1P3-201ENST00000395415 828 ntBASIC27.22■■□□□ 1.95
PCF11O94913 AC254562.1-201ENST00000417586 456 ntBASIC27.22■■□□□ 1.95
PCF11O94913 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC27.22■■□□□ 1.95
PCF11O94913 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC27.22■■□□□ 1.95
PCF11O94913 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC27.22■■□□□ 1.95
PCF11O94913 AL139327.4-201ENST00000612362 153 ntBASIC27.22■■□□□ 1.95
PCF11O94913 CITED2-204ENST00000618718 901 ntTSL 2 BASIC27.22■■□□□ 1.95
PCF11O94913 AC004877.2-201ENST00000623941 599 ntBASIC27.22■■□□□ 1.95
PCF11O94913 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PCF11O94913 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC27.21■■□□□ 1.95
PCF11O94913 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC27.21■■□□□ 1.95
PCF11O94913 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
PCF11O94913 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC27.21■■□□□ 1.95
PCF11O94913 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PCF11O94913 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC27.21■■□□□ 1.95
PCF11O94913 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC27.21■■□□□ 1.95
PCF11O94913 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCF11O94913 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PCF11O94913 PTMS-202ENST00000389462 773 ntTSL 2 BASIC27.21■■□□□ 1.95
PCF11O94913 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC27.21■■□□□ 1.95
PCF11O94913 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PCF11O94913 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC27.21■■□□□ 1.95
PCF11O94913 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC27.21■■□□□ 1.95
PCF11O94913 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCF11O94913 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PCF11O94913 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC27.21■■□□□ 1.95
PCF11O94913 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
PCF11O94913 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC27.2■■□□□ 1.95
PCF11O94913 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
PCF11O94913 BCAR1-209ENST00000546196 1340 ntBASIC27.2■■□□□ 1.95
PCF11O94913 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
PCF11O94913 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
PCF11O94913 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PCF11O94913 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PCF11O94913 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
PCF11O94913 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
PCF11O94913 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC27.2■■□□□ 1.94
PCF11O94913 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC27.2■■□□□ 1.94
PCF11O94913 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PCF11O94913 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
PCF11O94913 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
PCF11O94913 AC092919.2-201ENST00000623631 1645 ntBASIC27.2■■□□□ 1.94
PCF11O94913 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PCF11O94913 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC27.2■■□□□ 1.94
PCF11O94913 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
PCF11O94913 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
PCF11O94913 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PCF11O94913 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PCF11O94913 NABP1-203ENST00000409510 843 ntTSL 5 BASIC27.19■■□□□ 1.94
PCF11O94913 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PCF11O94913 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC27.19■■□□□ 1.94
PCF11O94913 GREM1-201ENST00000560677 623 ntTSL 4 BASIC27.19■■□□□ 1.94
PCF11O94913 AL096865.1-201ENST00000606796 927 ntBASIC27.19■■□□□ 1.94
PCF11O94913 AQP6-205ENST00000618286 829 ntTSL 5 BASIC27.19■■□□□ 1.94
PCF11O94913 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC27.19■■□□□ 1.94
PCF11O94913 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PCF11O94913 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCF11O94913 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PCF11O94913 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PCF11O94913 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC27.19■■□□□ 1.94
PCF11O94913 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC27.19■■□□□ 1.94
PCF11O94913 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCF11O94913 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC27.19■■□□□ 1.94
PCF11O94913 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PCF11O94913 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCF11O94913 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC27.18■■□□□ 1.94
PCF11O94913 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC27.18■■□□□ 1.94
PCF11O94913 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
PCF11O94913 AC096734.2-201ENST00000562054 433 ntBASIC27.18■■□□□ 1.94
PCF11O94913 AL031432.2-201ENST00000566714 459 ntBASIC27.18■■□□□ 1.94
PCF11O94913 AC005829.1-201ENST00000570002 483 ntBASIC27.18■■□□□ 1.94
PCF11O94913 AL928711.1-201ENST00000570165 459 ntBASIC27.18■■□□□ 1.94
PCF11O94913 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCF11O94913 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCF11O94913 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC27.18■■□□□ 1.94
PCF11O94913 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
PCF11O94913 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCF11O94913 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC27.18■■□□□ 1.94
PCF11O94913 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC27.18■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms