Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF40O75150 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF40O75150 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF40O75150 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF40O75150 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF40O75150 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF40O75150 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF40O75150 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF40O75150 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.05■□□□□ 0.64
RNF40O75150 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF40O75150 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.05■□□□□ 0.64
RNF40O75150 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF40O75150 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF40O75150 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF40O75150 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF40O75150 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF40O75150 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF40O75150 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF40O75150 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF40O75150 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
RNF40O75150 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RNF40O75150 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RNF40O75150 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF40O75150 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF40O75150 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF40O75150 KRT18P1-202ENST00000452408 1331 ntBASIC19.04■□□□□ 0.64
RNF40O75150 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF40O75150 AL023806.1-201ENST00000603994 1649 ntBASIC19.04■□□□□ 0.64
RNF40O75150 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF40O75150 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF40O75150 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF40O75150 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RNF40O75150 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF40O75150 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF40O75150 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
RNF40O75150 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF40O75150 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.04■□□□□ 0.64
RNF40O75150 TSPY22P-201ENST00000427496 604 ntBASIC19.04■□□□□ 0.64
RNF40O75150 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF40O75150 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF40O75150 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.04■□□□□ 0.64
RNF40O75150 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF40O75150 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.04■□□□□ 0.64
RNF40O75150 UBALD1-205ENST00000590891 2641 ntBASIC19.04■□□□□ 0.64
RNF40O75150 CICP6-201ENST00000457191 2729 ntBASIC19.04■□□□□ 0.64
RNF40O75150 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF40O75150 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF40O75150 MTMR9LP-203ENST00000426597 1545 ntBASIC19.04■□□□□ 0.64
RNF40O75150 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF40O75150 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF40O75150 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF40O75150 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF40O75150 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF40O75150 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF40O75150 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF40O75150 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF40O75150 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF40O75150 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF40O75150 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF40O75150 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RNF40O75150 MIR662-201ENST00000384847 95 ntBASIC19.03■□□□□ 0.64
RNF40O75150 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RNF40O75150 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF40O75150 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF40O75150 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF40O75150 FDX1P1-201ENST00000449115 551 ntBASIC19.03■□□□□ 0.64
RNF40O75150 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF40O75150 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RNF40O75150 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.03■□□□□ 0.64
RNF40O75150 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RNF40O75150 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RNF40O75150 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF40O75150 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF40O75150 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF40O75150 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RNF40O75150 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF40O75150 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF40O75150 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RNF40O75150 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF40O75150 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF40O75150 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF40O75150 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF40O75150 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RNF40O75150 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF40O75150 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF40O75150 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF40O75150 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF40O75150 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF40O75150 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF40O75150 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF40O75150 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.02■□□□□ 0.64
RNF40O75150 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RNF40O75150 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF40O75150 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF40O75150 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF40O75150 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF40O75150 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF40O75150 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF40O75150 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RNF40O75150 NUS1P1-201ENST00000446295 882 ntBASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms