Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE3O75131 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE3O75131 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE3O75131 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE3O75131 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.92■□□□□ 0.3
CPNE3O75131 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE3O75131 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE3O75131 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CPNE3O75131 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.92■□□□□ 0.3
CPNE3O75131 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE3O75131 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE3O75131 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.92■□□□□ 0.3
CPNE3O75131 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE3O75131 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CPNE3O75131 FAM220CP-201ENST00000395253 831 ntBASIC16.92■□□□□ 0.3
CPNE3O75131 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CPNE3O75131 ABCD1P5-201ENST00000445663 754 ntBASIC16.92■□□□□ 0.3
CPNE3O75131 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.92■□□□□ 0.3
CPNE3O75131 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.92■□□□□ 0.3
CPNE3O75131 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE3O75131 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.92■□□□□ 0.3
CPNE3O75131 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CPNE3O75131 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.92■□□□□ 0.3
CPNE3O75131 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE3O75131 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE3O75131 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.92■□□□□ 0.3
CPNE3O75131 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE3O75131 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CPNE3O75131 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE3O75131 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CPNE3O75131 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.92■□□□□ 0.3
CPNE3O75131 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE3O75131 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.92■□□□□ 0.3
CPNE3O75131 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CPNE3O75131 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CPNE3O75131 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.92■□□□□ 0.3
CPNE3O75131 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE3O75131 AC093010.1-201ENST00000473625 1624 ntBASIC16.92■□□□□ 0.3
CPNE3O75131 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.92■□□□□ 0.3
CPNE3O75131 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CPNE3O75131 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.92■□□□□ 0.3
CPNE3O75131 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.92■□□□□ 0.3
CPNE3O75131 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE3O75131 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE3O75131 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE3O75131 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE3O75131 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE3O75131 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.91■□□□□ 0.3
CPNE3O75131 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
CPNE3O75131 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.91■□□□□ 0.3
CPNE3O75131 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE3O75131 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE3O75131 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CPNE3O75131 AP005117.1-201ENST00000584346 1413 ntBASIC16.91■□□□□ 0.3
CPNE3O75131 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE3O75131 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE3O75131 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.91■□□□□ 0.3
CPNE3O75131 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE3O75131 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.91■□□□□ 0.3
CPNE3O75131 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE3O75131 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE3O75131 AC018712.1-201ENST00000455767 687 ntBASIC16.91■□□□□ 0.3
CPNE3O75131 RNPS1P1-201ENST00000507437 918 ntBASIC16.91■□□□□ 0.3
CPNE3O75131 RNA5SP419-201ENST00000515908 135 ntBASIC16.91■□□□□ 0.3
CPNE3O75131 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.91■□□□□ 0.3
CPNE3O75131 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.91■□□□□ 0.3
CPNE3O75131 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE3O75131 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CPNE3O75131 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.91■□□□□ 0.3
CPNE3O75131 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.91■□□□□ 0.3
CPNE3O75131 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE3O75131 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE3O75131 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.91■□□□□ 0.3
CPNE3O75131 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.91■□□□□ 0.3
CPNE3O75131 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE3O75131 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE3O75131 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE3O75131 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE3O75131 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE3O75131 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE3O75131 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE3O75131 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.91■□□□□ 0.3
CPNE3O75131 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.91■□□□□ 0.3
CPNE3O75131 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE3O75131 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE3O75131 AC022898.2-201ENST00000616822 1312 ntBASIC16.91■□□□□ 0.3
CPNE3O75131 AC097374.2-201ENST00000618617 1306 ntBASIC16.91■□□□□ 0.3
CPNE3O75131 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE3O75131 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.9■□□□□ 0.3
CPNE3O75131 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE3O75131 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE3O75131 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CPNE3O75131 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CPNE3O75131 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.9■□□□□ 0.3
CPNE3O75131 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CPNE3O75131 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CPNE3O75131 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.9■□□□□ 0.3
CPNE3O75131 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.9■□□□□ 0.3
CPNE3O75131 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
CPNE3O75131 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms