Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.63■□□□□ 0.25
URB1O60287 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
URB1O60287 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
URB1O60287 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
URB1O60287 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.63■□□□□ 0.25
URB1O60287 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
URB1O60287 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
URB1O60287 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.62■□□□□ 0.25
URB1O60287 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
URB1O60287 KRT8P47-201ENST00000604727 1398 ntBASIC16.62■□□□□ 0.25
URB1O60287 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
URB1O60287 GK-202ENST00000378941 458 ntTSL 3 BASIC16.62■□□□□ 0.25
URB1O60287 ELK2BP-201ENST00000415014 1224 ntBASIC16.62■□□□□ 0.25
URB1O60287 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.62■□□□□ 0.25
URB1O60287 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.62■□□□□ 0.25
URB1O60287 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.62■□□□□ 0.25
URB1O60287 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.62■□□□□ 0.25
URB1O60287 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
URB1O60287 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.62■□□□□ 0.25
URB1O60287 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.62■□□□□ 0.25
URB1O60287 AC141586.3-201ENST00000562166 1838 ntBASIC16.62■□□□□ 0.25
URB1O60287 AL499627.1-201ENST00000569373 2188 ntBASIC16.62■□□□□ 0.25
URB1O60287 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
URB1O60287 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.62■□□□□ 0.25
URB1O60287 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.62■□□□□ 0.25
URB1O60287 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
URB1O60287 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
URB1O60287 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.62■□□□□ 0.25
URB1O60287 AC055876.3-201ENST00000431496 288 ntBASIC16.62■□□□□ 0.25
URB1O60287 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.62■□□□□ 0.25
URB1O60287 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
URB1O60287 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.62■□□□□ 0.25
URB1O60287 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
URB1O60287 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.62■□□□□ 0.25
URB1O60287 AC138649.4-201ENST00000612222 287 ntBASIC16.62■□□□□ 0.25
URB1O60287 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
URB1O60287 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.62■□□□□ 0.25
URB1O60287 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
URB1O60287 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.62■□□□□ 0.25
URB1O60287 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
URB1O60287 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
URB1O60287 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
URB1O60287 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
URB1O60287 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.61■□□□□ 0.25
URB1O60287 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
URB1O60287 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
URB1O60287 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
URB1O60287 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.61■□□□□ 0.25
URB1O60287 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.61■□□□□ 0.25
URB1O60287 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
URB1O60287 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.61■□□□□ 0.25
URB1O60287 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.61■□□□□ 0.25
URB1O60287 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.61■□□□□ 0.25
URB1O60287 LINC00628-201ENST00000628516 1289 ntBASIC16.61■□□□□ 0.25
URB1O60287 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
URB1O60287 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
URB1O60287 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
URB1O60287 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.61■□□□□ 0.25
URB1O60287 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.61■□□□□ 0.25
URB1O60287 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
URB1O60287 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
URB1O60287 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
URB1O60287 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
URB1O60287 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
URB1O60287 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
URB1O60287 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
URB1O60287 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
URB1O60287 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.61■□□□□ 0.25
URB1O60287 AC022145.2-201ENST00000598203 171 ntBASIC16.61■□□□□ 0.25
URB1O60287 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
URB1O60287 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.61■□□□□ 0.25
URB1O60287 AL589182.2-201ENST00000619332 1049 ntBASIC16.61■□□□□ 0.25
URB1O60287 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
URB1O60287 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.61■□□□□ 0.25
URB1O60287 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.61■□□□□ 0.25
URB1O60287 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
URB1O60287 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
URB1O60287 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.6■□□□□ 0.25
URB1O60287 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.6■□□□□ 0.25
URB1O60287 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
URB1O60287 NCF1C-201ENST00000438382 1427 ntBASIC16.6■□□□□ 0.25
URB1O60287 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
URB1O60287 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
URB1O60287 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
URB1O60287 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
URB1O60287 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
URB1O60287 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
URB1O60287 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
URB1O60287 RNA5SP421-201ENST00000516864 134 ntBASIC16.6■□□□□ 0.25
URB1O60287 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
URB1O60287 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
URB1O60287 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
URB1O60287 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
URB1O60287 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.6■□□□□ 0.25
URB1O60287 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
URB1O60287 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
URB1O60287 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
URB1O60287 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
URB1O60287 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
URB1O60287 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms