Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRKNO60260 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRKNO60260 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRKNO60260 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.41■□□□□ 0.22
PRKNO60260 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PRKNO60260 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
PRKNO60260 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.4■□□□□ 0.22
PRKNO60260 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.4■□□□□ 0.22
PRKNO60260 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRKNO60260 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRKNO60260 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRKNO60260 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PRKNO60260 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRKNO60260 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRKNO60260 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRKNO60260 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRKNO60260 COX5BP2-201ENST00000392354 334 ntBASIC16.4■□□□□ 0.22
PRKNO60260 AC026396.1-201ENST00000419388 421 ntBASIC16.4■□□□□ 0.22
PRKNO60260 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRKNO60260 FAAHP1-202ENST00000446499 1238 ntBASIC16.4■□□□□ 0.22
PRKNO60260 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.4■□□□□ 0.22
PRKNO60260 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.4■□□□□ 0.22
PRKNO60260 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
PRKNO60260 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PRKNO60260 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRKNO60260 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRKNO60260 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PRKNO60260 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRKNO60260 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRKNO60260 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRKNO60260 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.4■□□□□ 0.22
PRKNO60260 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRKNO60260 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRKNO60260 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRKNO60260 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
PRKNO60260 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.4■□□□□ 0.22
PRKNO60260 PCDHB18P-201ENST00000524813 2368 ntBASIC16.4■□□□□ 0.22
PRKNO60260 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PRKNO60260 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
PRKNO60260 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
PRKNO60260 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKNO60260 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKNO60260 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKNO60260 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
PRKNO60260 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PRKNO60260 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PRKNO60260 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKNO60260 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKNO60260 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKNO60260 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKNO60260 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PRKNO60260 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKNO60260 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.39■□□□□ 0.21
PRKNO60260 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.39■□□□□ 0.21
PRKNO60260 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.39■□□□□ 0.21
PRKNO60260 AC009078.2-202ENST00000463353 338 ntBASIC16.39■□□□□ 0.21
PRKNO60260 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PRKNO60260 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.39■□□□□ 0.21
PRKNO60260 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.39■□□□□ 0.21
PRKNO60260 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PRKNO60260 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.39■□□□□ 0.21
PRKNO60260 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PRKNO60260 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PRKNO60260 AL121912.1-201ENST00000603683 238 ntBASIC16.39■□□□□ 0.21
PRKNO60260 TP73-AS1-207ENST00000624167 988 ntBASIC16.39■□□□□ 0.21
PRKNO60260 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PRKNO60260 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.39■□□□□ 0.21
PRKNO60260 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKNO60260 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKNO60260 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKNO60260 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PRKNO60260 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKNO60260 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
PRKNO60260 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.39■□□□□ 0.21
PRKNO60260 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKNO60260 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.39■□□□□ 0.21
PRKNO60260 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.39■□□□□ 0.21
PRKNO60260 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.39■□□□□ 0.21
PRKNO60260 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKNO60260 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKNO60260 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRKNO60260 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRKNO60260 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRKNO60260 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.38■□□□□ 0.21
PRKNO60260 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PRKNO60260 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRKNO60260 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.38■□□□□ 0.21
PRKNO60260 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRKNO60260 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PRKNO60260 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.38■□□□□ 0.21
PRKNO60260 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRKNO60260 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PRKNO60260 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRKNO60260 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PRKNO60260 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
PRKNO60260 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.38■□□□□ 0.21
PRKNO60260 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRKNO60260 ABCD1P5-201ENST00000445663 754 ntBASIC16.38■□□□□ 0.21
PRKNO60260 AC122714.2-201ENST00000502787 707 ntBASIC16.38■□□□□ 0.21
PRKNO60260 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms