Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSSCA1O60232 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SSSCA1O60232 MESTP1-201ENST00000404287 994 ntBASIC14.4□□□□□ -0.1
SSSCA1O60232 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSSCA1O60232 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.4□□□□□ -0.1
SSSCA1O60232 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SSSCA1O60232 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
SSSCA1O60232 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.4□□□□□ -0.1
SSSCA1O60232 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.4□□□□□ -0.1
SSSCA1O60232 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.4□□□□□ -0.1
SSSCA1O60232 AC104771.1-201ENST00000603335 964 ntBASIC14.4□□□□□ -0.1
SSSCA1O60232 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSSCA1O60232 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSSCA1O60232 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.4□□□□□ -0.1
SSSCA1O60232 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SSSCA1O60232 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSSCA1O60232 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSSCA1O60232 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.4□□□□□ -0.1
SSSCA1O60232 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.4□□□□□ -0.1
SSSCA1O60232 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSSCA1O60232 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SSSCA1O60232 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.4□□□□□ -0.1
SSSCA1O60232 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
SSSCA1O60232 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SSSCA1O60232 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SSSCA1O60232 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SSSCA1O60232 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSSCA1O60232 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
SSSCA1O60232 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSSCA1O60232 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSSCA1O60232 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SSSCA1O60232 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSSCA1O60232 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SSSCA1O60232 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.39□□□□□ -0.11
SSSCA1O60232 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSSCA1O60232 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSSCA1O60232 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSSCA1O60232 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SSSCA1O60232 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSSCA1O60232 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSSCA1O60232 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SSSCA1O60232 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SSSCA1O60232 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSSCA1O60232 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSSCA1O60232 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSSCA1O60232 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.39□□□□□ -0.11
SSSCA1O60232 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.39□□□□□ -0.11
SSSCA1O60232 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.39□□□□□ -0.11
SSSCA1O60232 RN7SL471P-201ENST00000580476 299 ntBASIC14.39□□□□□ -0.11
SSSCA1O60232 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.39□□□□□ -0.11
SSSCA1O60232 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SSSCA1O60232 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.39□□□□□ -0.11
SSSCA1O60232 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSSCA1O60232 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSSCA1O60232 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.39□□□□□ -0.11
SSSCA1O60232 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.39□□□□□ -0.11
SSSCA1O60232 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSSCA1O60232 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SSSCA1O60232 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SSSCA1O60232 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSSCA1O60232 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.39□□□□□ -0.11
SSSCA1O60232 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSSCA1O60232 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSSCA1O60232 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.39□□□□□ -0.11
SSSCA1O60232 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSSCA1O60232 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.39□□□□□ -0.11
SSSCA1O60232 AL162727.3-201ENST00000635661 2787 ntBASIC14.39□□□□□ -0.11
SSSCA1O60232 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSSCA1O60232 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSSCA1O60232 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSSCA1O60232 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSSCA1O60232 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SSSCA1O60232 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSSCA1O60232 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSSCA1O60232 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.38□□□□□ -0.11
SSSCA1O60232 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
SSSCA1O60232 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSSCA1O60232 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.38□□□□□ -0.11
SSSCA1O60232 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.38□□□□□ -0.11
SSSCA1O60232 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSSCA1O60232 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SSSCA1O60232 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.38□□□□□ -0.11
SSSCA1O60232 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSSCA1O60232 AC005915.1-201ENST00000624912 2018 ntBASIC14.38□□□□□ -0.11
SSSCA1O60232 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
SSSCA1O60232 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SSSCA1O60232 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SSSCA1O60232 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SSSCA1O60232 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SSSCA1O60232 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SSSCA1O60232 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSSCA1O60232 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.38□□□□□ -0.11
SSSCA1O60232 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.38□□□□□ -0.11
SSSCA1O60232 CA15P1-201ENST00000481698 905 ntBASIC14.38□□□□□ -0.11
SSSCA1O60232 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.38□□□□□ -0.11
SSSCA1O60232 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.38□□□□□ -0.11
SSSCA1O60232 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.38□□□□□ -0.11
SSSCA1O60232 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.38□□□□□ -0.11
SSSCA1O60232 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.38□□□□□ -0.11
SSSCA1O60232 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms