Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FOXS1O43638 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
FOXS1O43638 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FOXS1O43638 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
FOXS1O43638 AC133963.1-201ENST00000504166 1679 ntBASIC16.55■□□□□ 0.24
FOXS1O43638 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FOXS1O43638 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXS1O43638 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FOXS1O43638 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXS1O43638 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXS1O43638 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
FOXS1O43638 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FOXS1O43638 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXS1O43638 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FOXS1O43638 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXS1O43638 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.54■□□□□ 0.24
FOXS1O43638 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.54■□□□□ 0.24
FOXS1O43638 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXS1O43638 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXS1O43638 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FOXS1O43638 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXS1O43638 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXS1O43638 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
FOXS1O43638 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.54■□□□□ 0.24
FOXS1O43638 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXS1O43638 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.54■□□□□ 0.24
FOXS1O43638 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
FOXS1O43638 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.54■□□□□ 0.24
FOXS1O43638 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.54■□□□□ 0.24
FOXS1O43638 AP001005.1-201ENST00000571755 1248 ntBASIC16.54■□□□□ 0.24
FOXS1O43638 AL139327.4-201ENST00000612362 153 ntBASIC16.54■□□□□ 0.24
FOXS1O43638 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.54■□□□□ 0.24
FOXS1O43638 FAM215A-202ENST00000632077 792 ntBASIC16.54■□□□□ 0.24
FOXS1O43638 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FOXS1O43638 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
FOXS1O43638 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.54■□□□□ 0.24
FOXS1O43638 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.54■□□□□ 0.24
FOXS1O43638 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
FOXS1O43638 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.54■□□□□ 0.24
FOXS1O43638 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXS1O43638 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXS1O43638 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXS1O43638 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
FOXS1O43638 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXS1O43638 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXS1O43638 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.53■□□□□ 0.24
FOXS1O43638 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FOXS1O43638 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXS1O43638 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FOXS1O43638 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXS1O43638 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXS1O43638 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXS1O43638 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXS1O43638 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
FOXS1O43638 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXS1O43638 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
FOXS1O43638 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXS1O43638 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXS1O43638 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXS1O43638 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FOXS1O43638 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.53■□□□□ 0.24
FOXS1O43638 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FOXS1O43638 SIGLEC30P-201ENST00000455569 941 ntBASIC16.53■□□□□ 0.24
FOXS1O43638 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.53■□□□□ 0.24
FOXS1O43638 OR7E14P-202ENST00000530490 1290 ntBASIC16.53■□□□□ 0.24
FOXS1O43638 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.53■□□□□ 0.24
FOXS1O43638 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
FOXS1O43638 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.53■□□□□ 0.24
FOXS1O43638 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.53■□□□□ 0.24
FOXS1O43638 MIR7706-201ENST00000613747 67 ntBASIC16.53■□□□□ 0.24
FOXS1O43638 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.53■□□□□ 0.24
FOXS1O43638 AC107918.4-202ENST00000641623 219 ntBASIC16.53■□□□□ 0.24
FOXS1O43638 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXS1O43638 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
FOXS1O43638 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
FOXS1O43638 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FOXS1O43638 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXS1O43638 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXS1O43638 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.53■□□□□ 0.24
FOXS1O43638 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
FOXS1O43638 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXS1O43638 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXS1O43638 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FOXS1O43638 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXS1O43638 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXS1O43638 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXS1O43638 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXS1O43638 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.52■□□□□ 0.24
FOXS1O43638 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXS1O43638 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXS1O43638 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.52■□□□□ 0.24
FOXS1O43638 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.52■□□□□ 0.24
FOXS1O43638 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXS1O43638 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
FOXS1O43638 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXS1O43638 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
FOXS1O43638 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.52■□□□□ 0.24
FOXS1O43638 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXS1O43638 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FOXS1O43638 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms