Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC22.35■■□□□ 1.17
ABCC4O15439 ZNF259P1-201ENST00000407656 1365 ntBASIC22.35■■□□□ 1.17
ABCC4O15439 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
ABCC4O15439 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ABCC4O15439 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ABCC4O15439 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ABCC4O15439 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ABCC4O15439 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ABCC4O15439 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
ABCC4O15439 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC22.35■■□□□ 1.17
ABCC4O15439 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ABCC4O15439 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ABCC4O15439 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ABCC4O15439 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ABCC4O15439 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC22.35■■□□□ 1.17
ABCC4O15439 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
ABCC4O15439 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ABCC4O15439 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ABCC4O15439 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ABCC4O15439 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ABCC4O15439 MIR1233-2-201ENST00000408138 82 ntBASIC22.34■■□□□ 1.17
ABCC4O15439 MIR1233-1-201ENST00000408722 82 ntBASIC22.34■■□□□ 1.17
ABCC4O15439 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC22.34■■□□□ 1.17
ABCC4O15439 BX842568.4-201ENST00000421222 227 ntBASIC22.34■■□□□ 1.17
ABCC4O15439 COX10-202ENST00000429152 875 ntTSL 2 BASIC22.34■■□□□ 1.17
ABCC4O15439 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC22.34■■□□□ 1.17
ABCC4O15439 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
ABCC4O15439 AL353593.2-201ENST00000602529 1483 ntBASIC22.34■■□□□ 1.17
ABCC4O15439 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ABCC4O15439 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ABCC4O15439 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
ABCC4O15439 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
ABCC4O15439 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ABCC4O15439 LETM1P2-201ENST00000597330 2178 ntBASIC22.34■■□□□ 1.17
ABCC4O15439 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC22.33■■□□□ 1.17
ABCC4O15439 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
ABCC4O15439 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC22.33■■□□□ 1.17
ABCC4O15439 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC22.33■■□□□ 1.17
ABCC4O15439 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC22.33■■□□□ 1.17
ABCC4O15439 AC012640.2-201ENST00000561606 901 ntBASIC22.33■■□□□ 1.17
ABCC4O15439 AC145285.3-201ENST00000564603 959 ntBASIC22.33■■□□□ 1.17
ABCC4O15439 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC22.33■■□□□ 1.17
ABCC4O15439 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC22.33■■□□□ 1.17
ABCC4O15439 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC22.33■■□□□ 1.17
ABCC4O15439 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
ABCC4O15439 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ABCC4O15439 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
ABCC4O15439 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
ABCC4O15439 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC22.33■■□□□ 1.17
ABCC4O15439 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ABCC4O15439 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC22.33■■□□□ 1.17
ABCC4O15439 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC22.33■■□□□ 1.17
ABCC4O15439 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ABCC4O15439 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
ABCC4O15439 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
ABCC4O15439 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
ABCC4O15439 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
ABCC4O15439 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
ABCC4O15439 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
ABCC4O15439 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
ABCC4O15439 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
ABCC4O15439 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
ABCC4O15439 AC104109.2-201ENST00000602919 1418 ntBASIC22.33■■□□□ 1.16
ABCC4O15439 RPS2P28-201ENST00000314255 741 ntBASIC22.32■■□□□ 1.16
ABCC4O15439 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC22.32■■□□□ 1.16
ABCC4O15439 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC22.32■■□□□ 1.16
ABCC4O15439 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC22.32■■□□□ 1.16
ABCC4O15439 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC22.32■■□□□ 1.16
ABCC4O15439 PNMT-203ENST00000581428 677 ntTSL 2 BASIC22.32■■□□□ 1.16
ABCC4O15439 AC025062.2-201ENST00000605477 670 ntBASIC22.32■■□□□ 1.16
ABCC4O15439 AD001527.2-201ENST00000622994 785 ntBASIC22.32■■□□□ 1.16
ABCC4O15439 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ABCC4O15439 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
ABCC4O15439 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ABCC4O15439 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ABCC4O15439 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC22.32■■□□□ 1.16
ABCC4O15439 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC22.32■■□□□ 1.16
ABCC4O15439 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC22.32■■□□□ 1.16
ABCC4O15439 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC22.32■■□□□ 1.16
ABCC4O15439 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
ABCC4O15439 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
ABCC4O15439 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
ABCC4O15439 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ABCC4O15439 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ABCC4O15439 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC22.32■■□□□ 1.16
ABCC4O15439 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC22.32■■□□□ 1.16
ABCC4O15439 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ABCC4O15439 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
ABCC4O15439 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ABCC4O15439 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ABCC4O15439 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ABCC4O15439 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ABCC4O15439 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ABCC4O15439 LYSMD4-203ENST00000378904 2122 ntBASIC22.31■■□□□ 1.16
ABCC4O15439 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
ABCC4O15439 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC22.31■■□□□ 1.16
ABCC4O15439 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC22.31■■□□□ 1.16
ABCC4O15439 PGAM5P1-201ENST00000518923 814 ntBASIC22.31■■□□□ 1.16
ABCC4O15439 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC22.31■■□□□ 1.16
ABCC4O15439 CD63-204ENST00000546939 779 ntTSL 3 BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms