Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXN1O15353 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC21■□□□□ 0.95
FOXN1O15353 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21■□□□□ 0.95
FOXN1O15353 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
FOXN1O15353 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21■□□□□ 0.95
FOXN1O15353 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
FOXN1O15353 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXN1O15353 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21■□□□□ 0.95
FOXN1O15353 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXN1O15353 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21■□□□□ 0.95
FOXN1O15353 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21■□□□□ 0.95
FOXN1O15353 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
FOXN1O15353 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
FOXN1O15353 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
FOXN1O15353 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.99■□□□□ 0.95
FOXN1O15353 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.99■□□□□ 0.95
FOXN1O15353 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXN1O15353 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.99■□□□□ 0.95
FOXN1O15353 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.99■□□□□ 0.95
FOXN1O15353 CRYGEP-201ENST00000412192 528 ntBASIC20.99■□□□□ 0.95
FOXN1O15353 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FOXN1O15353 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.99■□□□□ 0.95
FOXN1O15353 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.99■□□□□ 0.95
FOXN1O15353 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.99■□□□□ 0.95
FOXN1O15353 RN7SL204P-201ENST00000582831 262 ntBASIC20.99■□□□□ 0.95
FOXN1O15353 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.99■□□□□ 0.95
FOXN1O15353 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.99■□□□□ 0.95
FOXN1O15353 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXN1O15353 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.99■□□□□ 0.95
FOXN1O15353 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXN1O15353 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
FOXN1O15353 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
FOXN1O15353 AC020763.4-201ENST00000623414 4170 ntBASIC20.99■□□□□ 0.95
FOXN1O15353 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
FOXN1O15353 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXN1O15353 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXN1O15353 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FOXN1O15353 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXN1O15353 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXN1O15353 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.99■□□□□ 0.95
FOXN1O15353 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.99■□□□□ 0.95
FOXN1O15353 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXN1O15353 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FOXN1O15353 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXN1O15353 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
FOXN1O15353 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXN1O15353 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.98■□□□□ 0.95
FOXN1O15353 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXN1O15353 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FOXN1O15353 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.98■□□□□ 0.95
FOXN1O15353 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXN1O15353 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FOXN1O15353 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXN1O15353 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
FOXN1O15353 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
FOXN1O15353 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.98■□□□□ 0.95
FOXN1O15353 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.98■□□□□ 0.95
FOXN1O15353 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
FOXN1O15353 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FOXN1O15353 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FOXN1O15353 MIR661-201ENST00000384842 89 ntBASIC20.98■□□□□ 0.95
FOXN1O15353 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
FOXN1O15353 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
FOXN1O15353 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.98■□□□□ 0.95
FOXN1O15353 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FOXN1O15353 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
FOXN1O15353 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.98■□□□□ 0.95
FOXN1O15353 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.98■□□□□ 0.95
FOXN1O15353 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXN1O15353 YTHDF3-AS1-201ENST00000603538 718 ntBASIC20.98■□□□□ 0.95
FOXN1O15353 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FOXN1O15353 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
FOXN1O15353 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXN1O15353 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.98■□□□□ 0.95
FOXN1O15353 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FOXN1O15353 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FOXN1O15353 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FOXN1O15353 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC20.98■□□□□ 0.95
FOXN1O15353 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
FOXN1O15353 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.98■□□□□ 0.95
FOXN1O15353 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.98■□□□□ 0.95
FOXN1O15353 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FOXN1O15353 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXN1O15353 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
FOXN1O15353 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXN1O15353 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.97■□□□□ 0.95
FOXN1O15353 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXN1O15353 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.97■□□□□ 0.95
FOXN1O15353 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXN1O15353 FAM86GP-201ENST00000448322 971 ntBASIC20.97■□□□□ 0.95
FOXN1O15353 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC20.97■□□□□ 0.95
FOXN1O15353 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.97■□□□□ 0.95
FOXN1O15353 AP005018.1-201ENST00000525475 301 ntBASIC20.97■□□□□ 0.95
FOXN1O15353 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.97■□□□□ 0.95
FOXN1O15353 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.97■□□□□ 0.95
FOXN1O15353 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
FOXN1O15353 AC004835.2-201ENST00000603762 682 ntBASIC20.97■□□□□ 0.95
FOXN1O15353 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXN1O15353 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.97■□□□□ 0.95
FOXN1O15353 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms