Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CHD1O14646 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CHD1O14646 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
CHD1O14646 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CHD1O14646 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC28.14■■■□□ 2.1
CHD1O14646 HCG4-201ENST00000418983 998 ntBASIC28.14■■■□□ 2.1
CHD1O14646 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC28.14■■■□□ 2.1
CHD1O14646 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
CHD1O14646 AC002558.1-201ENST00000488906 803 ntBASIC28.14■■■□□ 2.1
CHD1O14646 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CHD1O14646 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC28.14■■■□□ 2.1
CHD1O14646 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC28.14■■■□□ 2.1
CHD1O14646 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC28.14■■■□□ 2.1
CHD1O14646 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC28.14■■■□□ 2.1
CHD1O14646 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
CHD1O14646 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC28.14■■■□□ 2.09
CHD1O14646 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
CHD1O14646 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CHD1O14646 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
CHD1O14646 WASH6P-202ENST00000359512 1437 ntBASIC28.13■■■□□ 2.09
CHD1O14646 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
CHD1O14646 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC28.13■■■□□ 2.09
CHD1O14646 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC28.13■■■□□ 2.09
CHD1O14646 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC28.13■■■□□ 2.09
CHD1O14646 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC28.13■■■□□ 2.09
CHD1O14646 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC28.13■■■□□ 2.09
CHD1O14646 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC28.13■■■□□ 2.09
CHD1O14646 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CHD1O14646 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CHD1O14646 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CHD1O14646 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC28.12■■■□□ 2.09
CHD1O14646 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CHD1O14646 AL137060.1-201ENST00000618151 2648 ntBASIC28.12■■■□□ 2.09
CHD1O14646 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
CHD1O14646 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CHD1O14646 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC28.12■■■□□ 2.09
CHD1O14646 FAM86MP-201ENST00000340703 885 ntBASIC28.12■■■□□ 2.09
CHD1O14646 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC28.12■■■□□ 2.09
CHD1O14646 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC28.12■■■□□ 2.09
CHD1O14646 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
CHD1O14646 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
CHD1O14646 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC28.12■■■□□ 2.09
CHD1O14646 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CHD1O14646 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CHD1O14646 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC28.12■■■□□ 2.09
CHD1O14646 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CHD1O14646 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CHD1O14646 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CHD1O14646 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CHD1O14646 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CHD1O14646 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
CHD1O14646 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC28.11■■■□□ 2.09
CHD1O14646 COQ4-205ENST00000609948 956 ntTSL 2 BASIC28.11■■■□□ 2.09
CHD1O14646 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CHD1O14646 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC28.11■■■□□ 2.09
CHD1O14646 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC28.11■■■□□ 2.09
CHD1O14646 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CHD1O14646 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CHD1O14646 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CHD1O14646 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CHD1O14646 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC28.11■■■□□ 2.09
CHD1O14646 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CHD1O14646 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CHD1O14646 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
CHD1O14646 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CHD1O14646 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC28.1■■■□□ 2.09
CHD1O14646 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
CHD1O14646 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC28.1■■■□□ 2.09
CHD1O14646 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CHD1O14646 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CHD1O14646 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC28.1■■■□□ 2.09
CHD1O14646 SNX29P1-201ENST00000548357 1007 ntBASIC28.1■■■□□ 2.09
CHD1O14646 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
CHD1O14646 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CHD1O14646 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CHD1O14646 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC28.1■■■□□ 2.09
CHD1O14646 AL844908.2-201ENST00000609461 460 ntBASIC28.1■■■□□ 2.09
CHD1O14646 AC009949.1-201ENST00000623048 1830 ntBASIC28.1■■■□□ 2.09
CHD1O14646 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CHD1O14646 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CHD1O14646 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CHD1O14646 DGCR5-201ENST00000399539 862 ntBASIC28.09■■■□□ 2.09
CHD1O14646 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHD1O14646 ARL16-202ENST00000570561 768 ntTSL 2 BASIC28.09■■■□□ 2.09
CHD1O14646 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC28.09■■■□□ 2.09
CHD1O14646 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC28.09■■■□□ 2.09
CHD1O14646 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC28.09■■■□□ 2.09
CHD1O14646 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC28.09■■■□□ 2.09
CHD1O14646 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHD1O14646 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC28.09■■■□□ 2.09
CHD1O14646 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHD1O14646 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHD1O14646 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHD1O14646 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC28.09■■■□□ 2.09
CHD1O14646 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC28.09■■■□□ 2.09
CHD1O14646 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHD1O14646 MXI1-205ENST00000393134 889 ntTSL 2 BASIC28.09■■■□□ 2.09
CHD1O14646 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
CHD1O14646 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC28.09■■■□□ 2.09
CHD1O14646 STOM-203ENST00000538954 1257 ntTSL 5 BASIC28.09■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms