Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCL21O00585 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.45■□□□□ 0.06
CCL21O00585 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.45■□□□□ 0.06
CCL21O00585 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.45■□□□□ 0.06
CCL21O00585 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.45■□□□□ 0.06
CCL21O00585 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
CCL21O00585 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCL21O00585 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCL21O00585 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCL21O00585 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
CCL21O00585 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.45■□□□□ 0.06
CCL21O00585 AL096828.2-201ENST00000567259 1965 ntBASIC15.45■□□□□ 0.06
CCL21O00585 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCL21O00585 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCL21O00585 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCL21O00585 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.45■□□□□ 0.06
CCL21O00585 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCL21O00585 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCL21O00585 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.45■□□□□ 0.06
CCL21O00585 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCL21O00585 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.44■□□□□ 0.06
CCL21O00585 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
CCL21O00585 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.44■□□□□ 0.06
CCL21O00585 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCL21O00585 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.44■□□□□ 0.06
CCL21O00585 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.44■□□□□ 0.06
CCL21O00585 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCL21O00585 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CCL21O00585 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCL21O00585 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CCL21O00585 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCL21O00585 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCL21O00585 AL139400.1-201ENST00000366220 510 ntBASIC15.44■□□□□ 0.06
CCL21O00585 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.44■□□□□ 0.06
CCL21O00585 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCL21O00585 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCL21O00585 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.44■□□□□ 0.06
CCL21O00585 SPCS2P1-201ENST00000561636 679 ntBASIC15.44■□□□□ 0.06
CCL21O00585 OR7E47P-204ENST00000575924 449 ntBASIC15.44■□□□□ 0.06
CCL21O00585 AC093512.1-201ENST00000617969 520 ntBASIC15.44■□□□□ 0.06
CCL21O00585 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCL21O00585 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCL21O00585 AC073592.3-201ENST00000625118 1834 ntBASIC15.44■□□□□ 0.06
CCL21O00585 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
CCL21O00585 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CCL21O00585 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.44■□□□□ 0.06
CCL21O00585 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCL21O00585 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCL21O00585 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCL21O00585 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCL21O00585 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCL21O00585 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.44■□□□□ 0.06
CCL21O00585 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCL21O00585 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
CCL21O00585 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CCL21O00585 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
CCL21O00585 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CCL21O00585 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.43■□□□□ 0.06
CCL21O00585 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.43■□□□□ 0.06
CCL21O00585 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.43■□□□□ 0.06
CCL21O00585 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.43■□□□□ 0.06
CCL21O00585 CXCL1P1-201ENST00000502804 216 ntBASIC15.43■□□□□ 0.06
CCL21O00585 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.43■□□□□ 0.06
CCL21O00585 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 AC025678.2-201ENST00000562061 970 ntBASIC15.43■□□□□ 0.06
CCL21O00585 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.43■□□□□ 0.06
CCL21O00585 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.43■□□□□ 0.06
CCL21O00585 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.43■□□□□ 0.06
CCL21O00585 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.43■□□□□ 0.06
CCL21O00585 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
CCL21O00585 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.43■□□□□ 0.06
CCL21O00585 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 AC009949.1-201ENST00000623048 1830 ntBASIC15.43■□□□□ 0.06
CCL21O00585 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCL21O00585 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
CCL21O00585 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms