Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.82■□□□□ 0.28
RTCAO00442 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.82■□□□□ 0.28
RTCAO00442 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTCAO00442 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
RTCAO00442 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RTCAO00442 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.82■□□□□ 0.28
RTCAO00442 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.82■□□□□ 0.28
RTCAO00442 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.82■□□□□ 0.28
RTCAO00442 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.82■□□□□ 0.28
RTCAO00442 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.82■□□□□ 0.28
RTCAO00442 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.82■□□□□ 0.28
RTCAO00442 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.82■□□□□ 0.28
RTCAO00442 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.82■□□□□ 0.28
RTCAO00442 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTCAO00442 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RTCAO00442 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTCAO00442 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.82■□□□□ 0.28
RTCAO00442 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTCAO00442 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTCAO00442 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RTCAO00442 SIRPAP1-201ENST00000448467 1770 ntBASIC16.82■□□□□ 0.28
RTCAO00442 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.82■□□□□ 0.28
RTCAO00442 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RTCAO00442 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RTCAO00442 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RTCAO00442 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.81■□□□□ 0.28
RTCAO00442 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RTCAO00442 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTCAO00442 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.81■□□□□ 0.28
RTCAO00442 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.81■□□□□ 0.28
RTCAO00442 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTCAO00442 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTCAO00442 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTCAO00442 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTCAO00442 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
RTCAO00442 COX5BP2-201ENST00000392354 334 ntBASIC16.81■□□□□ 0.28
RTCAO00442 ATP5G2P1-201ENST00000433580 426 ntBASIC16.81■□□□□ 0.28
RTCAO00442 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.81■□□□□ 0.28
RTCAO00442 KRT17P6-201ENST00000453795 1220 ntBASIC16.81■□□□□ 0.28
RTCAO00442 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.81■□□□□ 0.28
RTCAO00442 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RTCAO00442 AC074051.2-201ENST00000565115 352 ntBASIC16.81■□□□□ 0.28
RTCAO00442 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.81■□□□□ 0.28
RTCAO00442 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.81■□□□□ 0.28
RTCAO00442 Z69720.1-201ENST00000601483 472 ntBASIC16.81■□□□□ 0.28
RTCAO00442 LINC01451-201ENST00000623792 534 ntBASIC16.81■□□□□ 0.28
RTCAO00442 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.81■□□□□ 0.28
RTCAO00442 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.81■□□□□ 0.28
RTCAO00442 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RTCAO00442 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RTCAO00442 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RTCAO00442 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RTCAO00442 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.81■□□□□ 0.28
RTCAO00442 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.81■□□□□ 0.28
RTCAO00442 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTCAO00442 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.81■□□□□ 0.28
RTCAO00442 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RTCAO00442 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RTCAO00442 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.81■□□□□ 0.28
RTCAO00442 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RTCAO00442 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RTCAO00442 AC012313.1-201ENST00000593393 3059 ntBASIC16.81■□□□□ 0.28
RTCAO00442 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RTCAO00442 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTCAO00442 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RTCAO00442 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTCAO00442 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RTCAO00442 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RTCAO00442 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTCAO00442 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RTCAO00442 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.8■□□□□ 0.28
RTCAO00442 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RTCAO00442 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RTCAO00442 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTCAO00442 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RTCAO00442 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.8■□□□□ 0.28
RTCAO00442 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTCAO00442 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTCAO00442 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.8■□□□□ 0.28
RTCAO00442 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTCAO00442 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTCAO00442 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTCAO00442 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTCAO00442 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.8■□□□□ 0.28
RTCAO00442 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.8■□□□□ 0.28
RTCAO00442 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTCAO00442 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.8■□□□□ 0.28
RTCAO00442 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTCAO00442 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.8■□□□□ 0.28
RTCAO00442 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RTCAO00442 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.8■□□□□ 0.28
RTCAO00442 AC092329.2-201ENST00000598402 547 ntBASIC16.8■□□□□ 0.28
RTCAO00442 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.8■□□□□ 0.28
RTCAO00442 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.8■□□□□ 0.28
RTCAO00442 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.8■□□□□ 0.28
RTCAO00442 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RTCAO00442 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.8■□□□□ 0.28
RTCAO00442 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.8■□□□□ 0.28
RTCAO00442 PKD1P1-201ENST00000458669 6805 ntBASIC16.8■□□□□ 0.28
RTCAO00442 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms