Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.79■□□□□ 0.6
O00370 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.79■□□□□ 0.6
O00370 AC099336.1-202ENST00000602961 463 ntBASIC18.79■□□□□ 0.6
O00370 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
O00370 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
O00370 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
O00370 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.79■□□□□ 0.6
O00370 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
O00370 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
O00370 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
O00370 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
O00370 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
O00370 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.78■□□□□ 0.6
O00370 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
O00370 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
O00370 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
O00370 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.78■□□□□ 0.6
O00370 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
O00370 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.78■□□□□ 0.6
O00370 AC096582.2-201ENST00000510860 516 ntBASIC18.78■□□□□ 0.6
O00370 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.78■□□□□ 0.6
O00370 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
O00370 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
O00370 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.78■□□□□ 0.6
O00370 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.78■□□□□ 0.6
O00370 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
O00370 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
O00370 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.78■□□□□ 0.6
O00370 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.78■□□□□ 0.6
O00370 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
O00370 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
O00370 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
O00370 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
O00370 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
O00370 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.78■□□□□ 0.6
O00370 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
O00370 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.78■□□□□ 0.6
O00370 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
O00370 LINC00304-203ENST00000565008 1864 ntBASIC18.77■□□□□ 0.6
O00370 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
O00370 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
O00370 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
O00370 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
O00370 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.77■□□□□ 0.6
O00370 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
O00370 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
O00370 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
O00370 AC141586.5-201ENST00000624546 2050 ntBASIC18.77■□□□□ 0.6
O00370 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
O00370 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
O00370 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.77■□□□□ 0.6
O00370 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
O00370 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.77■□□□□ 0.6
O00370 FAM220CP-201ENST00000395253 831 ntBASIC18.77■□□□□ 0.6
O00370 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
O00370 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
O00370 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
O00370 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.77■□□□□ 0.6
O00370 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.77■□□□□ 0.6
O00370 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
O00370 MIR3652-201ENST00000579335 131 ntBASIC18.77■□□□□ 0.6
O00370 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.77■□□□□ 0.6
O00370 AC114341.1-201ENST00000618070 349 ntBASIC18.77■□□□□ 0.6
O00370 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
O00370 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
O00370 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
O00370 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.77■□□□□ 0.59
O00370 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
O00370 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
O00370 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
O00370 AC108860.2-201ENST00000562760 2183 ntBASIC18.76■□□□□ 0.59
O00370 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
O00370 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
O00370 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
O00370 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
O00370 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
O00370 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
O00370 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
O00370 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.76■□□□□ 0.59
O00370 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
O00370 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
O00370 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
O00370 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
O00370 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
O00370 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
O00370 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
O00370 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
O00370 RCN1P2-201ENST00000398357 915 ntBASIC18.76■□□□□ 0.59
O00370 NUS1P1-201ENST00000446295 882 ntBASIC18.76■□□□□ 0.59
O00370 AC122714.2-201ENST00000502787 707 ntBASIC18.76■□□□□ 0.59
O00370 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.76■□□□□ 0.59
O00370 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
O00370 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.76■□□□□ 0.59
O00370 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
O00370 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
O00370 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
O00370 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
O00370 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
O00370 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
O00370 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms