Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC23.67■■□□□ 1.38
SBNO1A3KN83 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC23.67■■□□□ 1.38
SBNO1A3KN83 GATB-205ENST00000508611 605 ntTSL 2 BASIC23.67■■□□□ 1.38
SBNO1A3KN83 CCDC74BP1-201ENST00000508880 1123 ntBASIC23.67■■□□□ 1.38
SBNO1A3KN83 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC23.67■■□□□ 1.38
SBNO1A3KN83 DUX4L27-201ENST00000554796 1261 ntBASIC23.67■■□□□ 1.38
SBNO1A3KN83 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC23.67■■□□□ 1.38
SBNO1A3KN83 AC026120.1-201ENST00000611536 926 ntBASIC23.67■■□□□ 1.38
SBNO1A3KN83 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC23.67■■□□□ 1.38
SBNO1A3KN83 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC23.67■■□□□ 1.38
SBNO1A3KN83 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SBNO1A3KN83 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SBNO1A3KN83 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SBNO1A3KN83 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SBNO1A3KN83 AC135776.1-201ENST00000319817 2481 ntBASIC23.67■■□□□ 1.38
SBNO1A3KN83 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SBNO1A3KN83 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
SBNO1A3KN83 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC23.67■■□□□ 1.38
SBNO1A3KN83 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SBNO1A3KN83 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
SBNO1A3KN83 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SBNO1A3KN83 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SBNO1A3KN83 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
SBNO1A3KN83 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC23.66■■□□□ 1.38
SBNO1A3KN83 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SBNO1A3KN83 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SBNO1A3KN83 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC23.66■■□□□ 1.38
SBNO1A3KN83 TIMM8BP1-201ENST00000452384 211 ntBASIC23.66■■□□□ 1.38
SBNO1A3KN83 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SBNO1A3KN83 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SBNO1A3KN83 RBM7-207ENST00000544582 692 ntTSL 3 BASIC23.66■■□□□ 1.38
SBNO1A3KN83 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC23.66■■□□□ 1.38
SBNO1A3KN83 AC116407.2-201ENST00000613639 860 ntBASIC23.66■■□□□ 1.38
SBNO1A3KN83 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC23.66■■□□□ 1.38
SBNO1A3KN83 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SBNO1A3KN83 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
SBNO1A3KN83 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SBNO1A3KN83 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC23.66■■□□□ 1.38
SBNO1A3KN83 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SBNO1A3KN83 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SBNO1A3KN83 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC23.66■■□□□ 1.38
SBNO1A3KN83 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SBNO1A3KN83 FLYWCH1P1-201ENST00000460917 1874 ntBASIC23.66■■□□□ 1.38
SBNO1A3KN83 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
SBNO1A3KN83 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
SBNO1A3KN83 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
SBNO1A3KN83 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SBNO1A3KN83 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SBNO1A3KN83 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC23.66■■□□□ 1.38
SBNO1A3KN83 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SBNO1A3KN83 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SBNO1A3KN83 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SBNO1A3KN83 MYCLP1-201ENST00000372451 1075 ntBASIC23.65■■□□□ 1.38
SBNO1A3KN83 AC002056.1-201ENST00000395613 760 ntBASIC23.65■■□□□ 1.38
SBNO1A3KN83 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC23.65■■□□□ 1.38
SBNO1A3KN83 NMU-203ENST00000507338 658 ntTSL 3 BASIC23.65■■□□□ 1.38
SBNO1A3KN83 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC23.65■■□□□ 1.38
SBNO1A3KN83 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SBNO1A3KN83 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SBNO1A3KN83 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC23.65■■□□□ 1.38
SBNO1A3KN83 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SBNO1A3KN83 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC23.65■■□□□ 1.38
SBNO1A3KN83 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SBNO1A3KN83 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
SBNO1A3KN83 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC23.65■■□□□ 1.38
SBNO1A3KN83 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC23.65■■□□□ 1.38
SBNO1A3KN83 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
SBNO1A3KN83 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
SBNO1A3KN83 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SBNO1A3KN83 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
SBNO1A3KN83 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SBNO1A3KN83 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
SBNO1A3KN83 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC23.65■■□□□ 1.38
SBNO1A3KN83 AC015922.1-201ENST00000421102 1152 ntBASIC23.65■■□□□ 1.38
SBNO1A3KN83 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
SBNO1A3KN83 CNN2P2-201ENST00000443536 909 ntBASIC23.65■■□□□ 1.38
SBNO1A3KN83 CNN2P3-201ENST00000450201 906 ntBASIC23.65■■□□□ 1.38
SBNO1A3KN83 AL513480.1-201ENST00000451731 511 ntBASIC23.65■■□□□ 1.38
SBNO1A3KN83 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SBNO1A3KN83 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SBNO1A3KN83 AC093214.1-201ENST00000511688 1107 ntBASIC23.65■■□□□ 1.38
SBNO1A3KN83 KRT8P48-201ENST00000515599 1220 ntBASIC23.65■■□□□ 1.38
SBNO1A3KN83 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
SBNO1A3KN83 PUDP-206ENST00000540122 825 ntTSL 2 BASIC23.65■■□□□ 1.38
SBNO1A3KN83 AL512356.2-201ENST00000546955 174 ntBASIC23.65■■□□□ 1.38
SBNO1A3KN83 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC23.65■■□□□ 1.38
SBNO1A3KN83 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SBNO1A3KN83 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SBNO1A3KN83 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
SBNO1A3KN83 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC23.65■■□□□ 1.38
SBNO1A3KN83 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC23.65■■□□□ 1.38
SBNO1A3KN83 AL136317.3-201ENST00000618497 906 ntBASIC23.65■■□□□ 1.38
SBNO1A3KN83 AL035252.4-201ENST00000624174 288 ntBASIC23.65■■□□□ 1.38
SBNO1A3KN83 AC093503.3-201ENST00000624917 2352 ntBASIC23.65■■□□□ 1.38
SBNO1A3KN83 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23.64■■□□□ 1.38
SBNO1A3KN83 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC23.64■■□□□ 1.38
SBNO1A3KN83 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC23.64■■□□□ 1.37
SBNO1A3KN83 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC23.64■■□□□ 1.37
SBNO1A3KN83 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SBNO1A3KN83 CYP51A1P2-201ENST00000419457 1499 ntBASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms