Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 LINC00896-202ENST00000609602 2128 ntBASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 MIR574-201ENST00000385209 96 ntBASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 PMS2P1-201ENST00000431037 1228 ntBASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB1Q9Y5F3 AC005332.8-201ENST00000622750 2735 ntBASIC17.64■□□□□ 0.42
PCDHB1Q9Y5F3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHB1Q9Y5F3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 KRT18P13-201ENST00000400056 1290 ntBASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 MINOS1P3-201ENST00000457048 203 ntBASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB1Q9Y5F3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 AC064862.7-201ENST00000604520 867 ntBASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 AL773604.1-201ENST00000617417 272 ntBASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 AC117500.6-201ENST00000624871 588 ntBASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PCDHB1Q9Y5F3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms