Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.22■□□□□ 0.99
ZC3H4Q9UPT8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3H4Q9UPT8 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3H4Q9UPT8 RAC2-204ENST00000406508 893 ntTSL 5 BASIC21.22■□□□□ 0.99
ZC3H4Q9UPT8 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC21.22■□□□□ 0.99
ZC3H4Q9UPT8 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC21.22■□□□□ 0.99
ZC3H4Q9UPT8 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC21.22■□□□□ 0.99
ZC3H4Q9UPT8 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC21.22■□□□□ 0.99
ZC3H4Q9UPT8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.22■□□□□ 0.99
ZC3H4Q9UPT8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3H4Q9UPT8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3H4Q9UPT8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 WRB-204ENST00000398753 699 ntTSL 3 BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 FALEC-201ENST00000416894 566 ntTSL 3 BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 FAM185BP-201ENST00000443595 716 ntBASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 AC125807.1-201ENST00000483097 614 ntBASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H4Q9UPT8 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
ZC3H4Q9UPT8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 SIRPAP1-201ENST00000448467 1770 ntBASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 KRT18P32-201ENST00000424695 1287 ntBASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 SPDYE11-202ENST00000450699 704 ntBASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 BAD-207ENST00000544785 525 ntTSL 3 BASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 SPDYE9P-201ENST00000570642 692 ntBASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 AL158211.3-201ENST00000607385 239 ntBASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 SPDYE10P-202ENST00000612005 668 ntBASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 SPDYE8P-202ENST00000612377 668 ntBASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ZC3H4Q9UPT8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3H4Q9UPT8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3H4Q9UPT8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
ZC3H4Q9UPT8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.19■□□□□ 0.98
ZC3H4Q9UPT8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3H4Q9UPT8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC21.19■□□□□ 0.98
ZC3H4Q9UPT8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
ZC3H4Q9UPT8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3H4Q9UPT8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3H4Q9UPT8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3H4Q9UPT8 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3H4Q9UPT8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC21.19■□□□□ 0.98
ZC3H4Q9UPT8 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3H4Q9UPT8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.19■□□□□ 0.98
ZC3H4Q9UPT8 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC21.19■□□□□ 0.98
ZC3H4Q9UPT8 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC21.19■□□□□ 0.98
ZC3H4Q9UPT8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3H4Q9UPT8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ZC3H4Q9UPT8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3H4Q9UPT8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3H4Q9UPT8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3H4Q9UPT8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3H4Q9UPT8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3H4Q9UPT8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.19■□□□□ 0.98
ZC3H4Q9UPT8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ZC3H4Q9UPT8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
ZC3H4Q9UPT8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZC3H4Q9UPT8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.18■□□□□ 0.98
ZC3H4Q9UPT8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZC3H4Q9UPT8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ZC3H4Q9UPT8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ZC3H4Q9UPT8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC21.18■□□□□ 0.98
ZC3H4Q9UPT8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZC3H4Q9UPT8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms