Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19■□□□□ 0.63
GTF3C4Q9UKN8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 AC026396.1-201ENST00000419388 421 ntBASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 HTR7P1-202ENST00000624664 4411 ntBASIC18.99■□□□□ 0.63
GTF3C4Q9UKN8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
GTF3C4Q9UKN8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GTF3C4Q9UKN8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
GTF3C4Q9UKN8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
GTF3C4Q9UKN8 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GTF3C4Q9UKN8 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GTF3C4Q9UKN8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GTF3C4Q9UKN8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
GTF3C4Q9UKN8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GTF3C4Q9UKN8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.98■□□□□ 0.63
GTF3C4Q9UKN8 FAAHP1-202ENST00000446499 1238 ntBASIC18.98■□□□□ 0.63
GTF3C4Q9UKN8 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
GTF3C4Q9UKN8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.98■□□□□ 0.63
GTF3C4Q9UKN8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.98■□□□□ 0.63
GTF3C4Q9UKN8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
GTF3C4Q9UKN8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GTF3C4Q9UKN8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GTF3C4Q9UKN8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.98■□□□□ 0.63
GTF3C4Q9UKN8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GTF3C4Q9UKN8 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
GTF3C4Q9UKN8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.98■□□□□ 0.63
GTF3C4Q9UKN8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
GTF3C4Q9UKN8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
GTF3C4Q9UKN8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.98■□□□□ 0.63
GTF3C4Q9UKN8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 PP12613-201ENST00000424958 2230 ntBASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 KRT8P47-201ENST00000604727 1398 ntBASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 AKR1C7P-201ENST00000305623 895 ntBASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 AC133963.1-201ENST00000504166 1679 ntBASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 AL645608.8-201ENST00000606034 2086 ntBASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GTF3C4Q9UKN8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.96■□□□□ 0.63
GTF3C4Q9UKN8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms