Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.97■□□□□ 0.79
CPA4Q9UI42 DDX43P3-201ENST00000441064 443 ntBASIC19.97■□□□□ 0.79
CPA4Q9UI42 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPA4Q9UI42 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.97■□□□□ 0.79
CPA4Q9UI42 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.97■□□□□ 0.79
CPA4Q9UI42 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.97■□□□□ 0.79
CPA4Q9UI42 ACTL9-202ENST00000612068 1252 ntBASIC19.97■□□□□ 0.79
CPA4Q9UI42 AC009093.7-201ENST00000623853 1223 ntBASIC19.97■□□□□ 0.79
CPA4Q9UI42 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.97■□□□□ 0.79
CPA4Q9UI42 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.97■□□□□ 0.79
CPA4Q9UI42 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CPA4Q9UI42 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPA4Q9UI42 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CPA4Q9UI42 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPA4Q9UI42 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPA4Q9UI42 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPA4Q9UI42 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPA4Q9UI42 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.97■□□□□ 0.79
CPA4Q9UI42 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPA4Q9UI42 BX276092.7-203ENST00000637198 1536 ntBASIC19.97■□□□□ 0.79
CPA4Q9UI42 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CPA4Q9UI42 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPA4Q9UI42 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPA4Q9UI42 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPA4Q9UI42 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPA4Q9UI42 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPA4Q9UI42 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CPA4Q9UI42 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPA4Q9UI42 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.96■□□□□ 0.79
CPA4Q9UI42 INGX-202ENST00000489074 768 ntBASIC19.96■□□□□ 0.79
CPA4Q9UI42 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.96■□□□□ 0.79
CPA4Q9UI42 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.96■□□□□ 0.79
CPA4Q9UI42 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.96■□□□□ 0.79
CPA4Q9UI42 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPA4Q9UI42 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPA4Q9UI42 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.96■□□□□ 0.79
CPA4Q9UI42 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.96■□□□□ 0.79
CPA4Q9UI42 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPA4Q9UI42 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPA4Q9UI42 AL590787.1-201ENST00000568856 1315 ntBASIC19.96■□□□□ 0.79
CPA4Q9UI42 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CPA4Q9UI42 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CPA4Q9UI42 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.79
CPA4Q9UI42 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.95■□□□□ 0.79
CPA4Q9UI42 AL096828.2-201ENST00000567259 1965 ntBASIC19.95■□□□□ 0.78
CPA4Q9UI42 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPA4Q9UI42 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPA4Q9UI42 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPA4Q9UI42 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPA4Q9UI42 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CPA4Q9UI42 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPA4Q9UI42 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPA4Q9UI42 AC005237.2-201ENST00000434368 219 ntBASIC19.95■□□□□ 0.78
CPA4Q9UI42 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.95■□□□□ 0.78
CPA4Q9UI42 HLA-J-202ENST00000469281 1241 ntBASIC19.95■□□□□ 0.78
CPA4Q9UI42 AC067863.1-201ENST00000494933 530 ntBASIC19.95■□□□□ 0.78
CPA4Q9UI42 KRT8P48-201ENST00000515599 1220 ntBASIC19.95■□□□□ 0.78
CPA4Q9UI42 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.95■□□□□ 0.78
CPA4Q9UI42 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.95■□□□□ 0.78
CPA4Q9UI42 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPA4Q9UI42 AC026120.1-201ENST00000611536 926 ntBASIC19.95■□□□□ 0.78
CPA4Q9UI42 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPA4Q9UI42 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CPA4Q9UI42 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.95■□□□□ 0.78
CPA4Q9UI42 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPA4Q9UI42 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.95■□□□□ 0.78
CPA4Q9UI42 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPA4Q9UI42 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPA4Q9UI42 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPA4Q9UI42 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPA4Q9UI42 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPA4Q9UI42 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CPA4Q9UI42 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPA4Q9UI42 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPA4Q9UI42 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.94■□□□□ 0.78
CPA4Q9UI42 AL031598.1-201ENST00000561511 1773 ntBASIC19.94■□□□□ 0.78
CPA4Q9UI42 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPA4Q9UI42 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPA4Q9UI42 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.94■□□□□ 0.78
CPA4Q9UI42 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.94■□□□□ 0.78
CPA4Q9UI42 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPA4Q9UI42 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CPA4Q9UI42 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.94■□□□□ 0.78
CPA4Q9UI42 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.94■□□□□ 0.78
CPA4Q9UI42 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.94■□□□□ 0.78
CPA4Q9UI42 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPA4Q9UI42 AC015911.4-201ENST00000588022 1070 ntBASIC19.94■□□□□ 0.78
CPA4Q9UI42 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CPA4Q9UI42 AC116407.2-201ENST00000613639 860 ntBASIC19.94■□□□□ 0.78
CPA4Q9UI42 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.94■□□□□ 0.78
CPA4Q9UI42 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
CPA4Q9UI42 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPA4Q9UI42 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPA4Q9UI42 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.94■□□□□ 0.78
CPA4Q9UI42 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.94■□□□□ 0.78
CPA4Q9UI42 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPA4Q9UI42 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPA4Q9UI42 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPA4Q9UI42 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CPA4Q9UI42 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms