Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP25Q9UHP3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP25Q9UHP3 AC133963.1-201ENST00000504166 1679 ntBASIC20.24■□□□□ 0.83
USP25Q9UHP3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP25Q9UHP3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.24■□□□□ 0.83
USP25Q9UHP3 SLC25A3P1-201ENST00000443844 931 ntBASIC20.24■□□□□ 0.83
USP25Q9UHP3 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.24■□□□□ 0.83
USP25Q9UHP3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.24■□□□□ 0.83
USP25Q9UHP3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.24■□□□□ 0.83
USP25Q9UHP3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.24■□□□□ 0.83
USP25Q9UHP3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP25Q9UHP3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
USP25Q9UHP3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP25Q9UHP3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP25Q9UHP3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.24■□□□□ 0.83
USP25Q9UHP3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP25Q9UHP3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.24■□□□□ 0.83
USP25Q9UHP3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP25Q9UHP3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.24■□□□□ 0.83
USP25Q9UHP3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.24■□□□□ 0.83
USP25Q9UHP3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
USP25Q9UHP3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP25Q9UHP3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP25Q9UHP3 AC105020.1-201ENST00000435356 2205 ntBASIC20.23■□□□□ 0.83
USP25Q9UHP3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP25Q9UHP3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP25Q9UHP3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP25Q9UHP3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP25Q9UHP3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP25Q9UHP3 AGGF1P2-201ENST00000426656 2106 ntBASIC20.23■□□□□ 0.83
USP25Q9UHP3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP25Q9UHP3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP25Q9UHP3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.23■□□□□ 0.83
USP25Q9UHP3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP25Q9UHP3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP25Q9UHP3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP25Q9UHP3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
USP25Q9UHP3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP25Q9UHP3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.23■□□□□ 0.83
USP25Q9UHP3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
USP25Q9UHP3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.23■□□□□ 0.83
USP25Q9UHP3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.23■□□□□ 0.83
USP25Q9UHP3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.23■□□□□ 0.83
USP25Q9UHP3 AC024563.2-201ENST00000603282 481 ntBASIC20.23■□□□□ 0.83
USP25Q9UHP3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.23■□□□□ 0.83
USP25Q9UHP3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP25Q9UHP3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP25Q9UHP3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP25Q9UHP3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.23■□□□□ 0.83
USP25Q9UHP3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
USP25Q9UHP3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP25Q9UHP3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP25Q9UHP3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.23■□□□□ 0.83
USP25Q9UHP3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC20.23■□□□□ 0.83
USP25Q9UHP3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
USP25Q9UHP3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
USP25Q9UHP3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP25Q9UHP3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
USP25Q9UHP3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP25Q9UHP3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP25Q9UHP3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP25Q9UHP3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.22■□□□□ 0.83
USP25Q9UHP3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP25Q9UHP3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP25Q9UHP3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP25Q9UHP3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.22■□□□□ 0.83
USP25Q9UHP3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP25Q9UHP3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP25Q9UHP3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP25Q9UHP3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.22■□□□□ 0.83
USP25Q9UHP3 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.22■□□□□ 0.83
USP25Q9UHP3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.22■□□□□ 0.83
USP25Q9UHP3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
USP25Q9UHP3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
USP25Q9UHP3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.22■□□□□ 0.83
USP25Q9UHP3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
USP25Q9UHP3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
USP25Q9UHP3 AC140113.3-201ENST00000605663 199 ntBASIC20.22■□□□□ 0.83
USP25Q9UHP3 AC116407.2-201ENST00000613639 860 ntBASIC20.22■□□□□ 0.83
USP25Q9UHP3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP25Q9UHP3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP25Q9UHP3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP25Q9UHP3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP25Q9UHP3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP25Q9UHP3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP25Q9UHP3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
USP25Q9UHP3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.22■□□□□ 0.83
USP25Q9UHP3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.22■□□□□ 0.83
USP25Q9UHP3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP25Q9UHP3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
USP25Q9UHP3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.22■□□□□ 0.83
USP25Q9UHP3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
USP25Q9UHP3 PCDHA14-201ENST00000506751 2298 ntBASIC20.22■□□□□ 0.83
USP25Q9UHP3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP25Q9UHP3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP25Q9UHP3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.21■□□□□ 0.83
USP25Q9UHP3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP25Q9UHP3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP25Q9UHP3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.21■□□□□ 0.83
USP25Q9UHP3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms