Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 KRT8P47-201ENST00000604727 1398 ntBASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 AC008608.2-201ENST00000606089 416 ntBASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 AP001269.4-201ENST00000609611 512 ntBASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 AC097374.2-201ENST00000618617 1306 ntBASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLIP2Q9UDT6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 HTR7P1-202ENST00000624664 4411 ntBASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 AC022898.2-201ENST00000616822 1312 ntBASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLIP2Q9UDT6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLIP2Q9UDT6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLIP2Q9UDT6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CLIP2Q9UDT6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLIP2Q9UDT6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.89■□□□□ 0.94
CLIP2Q9UDT6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.89■□□□□ 0.93
CLIP2Q9UDT6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLIP2Q9UDT6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLIP2Q9UDT6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CLIP2Q9UDT6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.89■□□□□ 0.93
CLIP2Q9UDT6 FAM197Y8-203ENST00000450145 560 ntBASIC20.89■□□□□ 0.93
CLIP2Q9UDT6 AC106795.1-205ENST00000512851 1056 ntBASIC20.89■□□□□ 0.93
CLIP2Q9UDT6 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.89■□□□□ 0.93
CLIP2Q9UDT6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
CLIP2Q9UDT6 MTDHP3-201ENST00000594186 672 ntBASIC20.89■□□□□ 0.93
CLIP2Q9UDT6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CLIP2Q9UDT6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.89■□□□□ 0.93
CLIP2Q9UDT6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLIP2Q9UDT6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.89■□□□□ 0.93
CLIP2Q9UDT6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLIP2Q9UDT6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CLIP2Q9UDT6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLIP2Q9UDT6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLIP2Q9UDT6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLIP2Q9UDT6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLIP2Q9UDT6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIP2Q9UDT6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.88■□□□□ 0.93
CLIP2Q9UDT6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIP2Q9UDT6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.88■□□□□ 0.93
CLIP2Q9UDT6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIP2Q9UDT6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.88■□□□□ 0.93
CLIP2Q9UDT6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIP2Q9UDT6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLIP2Q9UDT6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.88■□□□□ 0.93
CLIP2Q9UDT6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLIP2Q9UDT6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIP2Q9UDT6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.88■□□□□ 0.93
CLIP2Q9UDT6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
CLIP2Q9UDT6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.88■□□□□ 0.93
CLIP2Q9UDT6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.88■□□□□ 0.93
CLIP2Q9UDT6 REXO1L9P-201ENST00000604264 2108 ntBASIC20.88■□□□□ 0.93
CLIP2Q9UDT6 LINC00896-202ENST00000609602 2128 ntBASIC20.88■□□□□ 0.93
CLIP2Q9UDT6 AL355877.3-201ENST00000622820 899 ntBASIC20.88■□□□□ 0.93
CLIP2Q9UDT6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIP2Q9UDT6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIP2Q9UDT6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLIP2Q9UDT6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms