Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.58■□□□□ 0.4
SPASTQ9UBP0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SPASTQ9UBP0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.58■□□□□ 0.4
SPASTQ9UBP0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SPASTQ9UBP0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPASTQ9UBP0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SPASTQ9UBP0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 RNA5SP419-201ENST00000515908 135 ntBASIC17.57■□□□□ 0.4
SPASTQ9UBP0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 AP001269.4-201ENST00000609611 512 ntBASIC17.57■□□□□ 0.4
SPASTQ9UBP0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 AC020916.1-201ENST00000587762 1774 ntBASIC17.57■□□□□ 0.4
SPASTQ9UBP0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPASTQ9UBP0 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 AC135776.1-201ENST00000319817 2481 ntBASIC17.56■□□□□ 0.4
SPASTQ9UBP0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 ABCD1P5-201ENST00000445663 754 ntBASIC17.56■□□□□ 0.4
SPASTQ9UBP0 RNPS1P1-201ENST00000507437 918 ntBASIC17.56■□□□□ 0.4
SPASTQ9UBP0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.56■□□□□ 0.4
SPASTQ9UBP0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPASTQ9UBP0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 AP005117.1-201ENST00000584346 1413 ntBASIC17.55■□□□□ 0.4
SPASTQ9UBP0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 IL9RP2-201ENST00000423948 1312 ntBASIC17.55■□□□□ 0.4
SPASTQ9UBP0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 RPS2P28-201ENST00000314255 741 ntBASIC17.55■□□□□ 0.4
SPASTQ9UBP0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SPASTQ9UBP0 AC018712.1-201ENST00000455767 687 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms