Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.52■□□□□ 0.56
CHD7Q9P2D1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHD7Q9P2D1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
CHD7Q9P2D1 AL096828.2-201ENST00000567259 1965 ntBASIC18.52■□□□□ 0.56
CHD7Q9P2D1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHD7Q9P2D1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.52■□□□□ 0.56
CHD7Q9P2D1 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHD7Q9P2D1 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.52■□□□□ 0.56
CHD7Q9P2D1 AC125807.1-201ENST00000483097 614 ntBASIC18.52■□□□□ 0.56
CHD7Q9P2D1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHD7Q9P2D1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHD7Q9P2D1 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHD7Q9P2D1 AC243562.1-201ENST00000560672 389 ntBASIC18.52■□□□□ 0.56
CHD7Q9P2D1 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.52■□□□□ 0.56
CHD7Q9P2D1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.52■□□□□ 0.56
CHD7Q9P2D1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHD7Q9P2D1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
CHD7Q9P2D1 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHD7Q9P2D1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CHD7Q9P2D1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHD7Q9P2D1 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHD7Q9P2D1 SPDYE11-202ENST00000450699 704 ntBASIC18.52■□□□□ 0.56
CHD7Q9P2D1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.52■□□□□ 0.56
CHD7Q9P2D1 SPDYE9P-201ENST00000570642 692 ntBASIC18.52■□□□□ 0.56
CHD7Q9P2D1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.52■□□□□ 0.56
CHD7Q9P2D1 SPDYE10P-202ENST00000612005 668 ntBASIC18.52■□□□□ 0.56
CHD7Q9P2D1 SPDYE8P-202ENST00000612377 668 ntBASIC18.52■□□□□ 0.56
CHD7Q9P2D1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHD7Q9P2D1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CHD7Q9P2D1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
CHD7Q9P2D1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CHD7Q9P2D1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
CHD7Q9P2D1 AC093010.1-201ENST00000473625 1624 ntBASIC18.51■□□□□ 0.55
CHD7Q9P2D1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.51■□□□□ 0.55
CHD7Q9P2D1 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 AC112191.1-201ENST00000523689 701 ntBASIC18.51■□□□□ 0.55
CHD7Q9P2D1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 AL592309.1-201ENST00000443127 649 ntBASIC18.51■□□□□ 0.55
CHD7Q9P2D1 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.51■□□□□ 0.55
CHD7Q9P2D1 CXCL1P1-201ENST00000502804 216 ntBASIC18.51■□□□□ 0.55
CHD7Q9P2D1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.51■□□□□ 0.55
CHD7Q9P2D1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CHD7Q9P2D1 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.5■□□□□ 0.55
CHD7Q9P2D1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHD7Q9P2D1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.5■□□□□ 0.55
CHD7Q9P2D1 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHD7Q9P2D1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHD7Q9P2D1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHD7Q9P2D1 PI4KAP1-204ENST00000612579 1703 ntBASIC18.5■□□□□ 0.55
CHD7Q9P2D1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHD7Q9P2D1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHD7Q9P2D1 TREML5P-201ENST00000421694 576 ntBASIC18.5■□□□□ 0.55
CHD7Q9P2D1 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.5■□□□□ 0.55
CHD7Q9P2D1 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.5■□□□□ 0.55
CHD7Q9P2D1 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.5■□□□□ 0.55
CHD7Q9P2D1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.5■□□□□ 0.55
CHD7Q9P2D1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.5■□□□□ 0.55
CHD7Q9P2D1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHD7Q9P2D1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHD7Q9P2D1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.5■□□□□ 0.55
CHD7Q9P2D1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHD7Q9P2D1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CHD7Q9P2D1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHD7Q9P2D1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.5■□□□□ 0.55
CHD7Q9P2D1 AL390754.1-201ENST00000619088 582 ntBASIC18.5■□□□□ 0.55
CHD7Q9P2D1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHD7Q9P2D1 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.5■□□□□ 0.55
CHD7Q9P2D1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHD7Q9P2D1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.49■□□□□ 0.55
CHD7Q9P2D1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms