Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 RN7SL606P-201ENST00000472779 293 ntBASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 AC011840.4-201ENST00000578471 627 ntBASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 AC138894.3-201ENST00000603787 634 ntBASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 AL353801.3-201ENST00000609898 542 ntBASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
NCKIPSDQ9NZQ3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 LINC00167-201ENST00000530583 1419 ntBASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 AL031008.1-201ENST00000619963 541 ntBASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCKIPSDQ9NZQ3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 IGHV3-47-201ENST00000425060 335 ntBASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 AC106795.1-205ENST00000512851 1056 ntBASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms