Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.24■□□□□ 0.67
TRMT13Q9NUP7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.24■□□□□ 0.67
TRMT13Q9NUP7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.24■□□□□ 0.67
TRMT13Q9NUP7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.24■□□□□ 0.67
TRMT13Q9NUP7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRMT13Q9NUP7 AC092364.2-202ENST00000597012 1073 ntBASIC19.24■□□□□ 0.67
TRMT13Q9NUP7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.24■□□□□ 0.67
TRMT13Q9NUP7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRMT13Q9NUP7 PI4KAP1-204ENST00000612579 1703 ntBASIC19.24■□□□□ 0.67
TRMT13Q9NUP7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRMT13Q9NUP7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRMT13Q9NUP7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.24■□□□□ 0.67
TRMT13Q9NUP7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRMT13Q9NUP7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
TRMT13Q9NUP7 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.24■□□□□ 0.67
TRMT13Q9NUP7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRMT13Q9NUP7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.24■□□□□ 0.67
TRMT13Q9NUP7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
TRMT13Q9NUP7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRMT13Q9NUP7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 ACTG1P14-201ENST00000446382 1122 ntBASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 AP000344.2-201ENST00000512987 629 ntBASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 AC092902.6-201ENST00000641783 218 ntBASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRMT13Q9NUP7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 DDX43P3-201ENST00000441064 443 ntBASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 AC007064.4-201ENST00000637740 555 ntBASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT13Q9NUP7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRMT13Q9NUP7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TRMT13Q9NUP7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.21■□□□□ 0.67
TRMT13Q9NUP7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRMT13Q9NUP7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRMT13Q9NUP7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRMT13Q9NUP7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.21■□□□□ 0.67
TRMT13Q9NUP7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRMT13Q9NUP7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.21■□□□□ 0.67
TRMT13Q9NUP7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRMT13Q9NUP7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.21■□□□□ 0.67
TRMT13Q9NUP7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.21■□□□□ 0.67
TRMT13Q9NUP7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.21■□□□□ 0.67
TRMT13Q9NUP7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.21■□□□□ 0.67
TRMT13Q9NUP7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.21■□□□□ 0.67
TRMT13Q9NUP7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.21■□□□□ 0.67
TRMT13Q9NUP7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRMT13Q9NUP7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRMT13Q9NUP7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.21■□□□□ 0.67
TRMT13Q9NUP7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TRMT13Q9NUP7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.21■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms