Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HES4Q9HCC6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HES4Q9HCC6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HES4Q9HCC6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
HES4Q9HCC6 AC124864.1-201ENST00000623408 392 ntBASIC14.93□□□□□ -0.02
HES4Q9HCC6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HES4Q9HCC6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.93□□□□□ -0.02
HES4Q9HCC6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
HES4Q9HCC6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HES4Q9HCC6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.93□□□□□ -0.02
HES4Q9HCC6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
HES4Q9HCC6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HES4Q9HCC6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HES4Q9HCC6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HES4Q9HCC6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
HES4Q9HCC6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.93□□□□□ -0.02
HES4Q9HCC6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HES4Q9HCC6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HES4Q9HCC6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HES4Q9HCC6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HES4Q9HCC6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HES4Q9HCC6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HES4Q9HCC6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HES4Q9HCC6 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HES4Q9HCC6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HES4Q9HCC6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HES4Q9HCC6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.92□□□□□ -0.02
HES4Q9HCC6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HES4Q9HCC6 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.92□□□□□ -0.02
HES4Q9HCC6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.92□□□□□ -0.02
HES4Q9HCC6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HES4Q9HCC6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HES4Q9HCC6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.92□□□□□ -0.02
HES4Q9HCC6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HES4Q9HCC6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HES4Q9HCC6 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HES4Q9HCC6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.92□□□□□ -0.02
HES4Q9HCC6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HES4Q9HCC6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HES4Q9HCC6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HES4Q9HCC6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HES4Q9HCC6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.92□□□□□ -0.02
HES4Q9HCC6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HES4Q9HCC6 AC246785.2-201ENST00000432512 513 ntBASIC14.92□□□□□ -0.02
HES4Q9HCC6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HES4Q9HCC6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.92□□□□□ -0.02
HES4Q9HCC6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.92□□□□□ -0.02
HES4Q9HCC6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.92□□□□□ -0.02
HES4Q9HCC6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.92□□□□□ -0.02
HES4Q9HCC6 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.92□□□□□ -0.02
HES4Q9HCC6 AL121672.3-201ENST00000608644 468 ntBASIC14.92□□□□□ -0.02
HES4Q9HCC6 IGHV3-41-201ENST00000613121 348 ntBASIC14.92□□□□□ -0.02
HES4Q9HCC6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HES4Q9HCC6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HES4Q9HCC6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
HES4Q9HCC6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.92□□□□□ -0.02
HES4Q9HCC6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HES4Q9HCC6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
HES4Q9HCC6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HES4Q9HCC6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
HES4Q9HCC6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HES4Q9HCC6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HES4Q9HCC6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HES4Q9HCC6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HES4Q9HCC6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.92□□□□□ -0.02
HES4Q9HCC6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HES4Q9HCC6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HES4Q9HCC6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HES4Q9HCC6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HES4Q9HCC6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HES4Q9HCC6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HES4Q9HCC6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HES4Q9HCC6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HES4Q9HCC6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
HES4Q9HCC6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HES4Q9HCC6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HES4Q9HCC6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HES4Q9HCC6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HES4Q9HCC6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
HES4Q9HCC6 AC010460.3-201ENST00000511359 1579 ntBASIC14.91□□□□□ -0.02
HES4Q9HCC6 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.91□□□□□ -0.02
HES4Q9HCC6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HES4Q9HCC6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.91□□□□□ -0.02
HES4Q9HCC6 AC016734.2-201ENST00000624325 1377 ntBASIC14.91□□□□□ -0.02
HES4Q9HCC6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HES4Q9HCC6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
HES4Q9HCC6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HES4Q9HCC6 COX5BP2-201ENST00000392354 334 ntBASIC14.91□□□□□ -0.02
HES4Q9HCC6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.91□□□□□ -0.02
HES4Q9HCC6 PCED1CP-201ENST00000419887 785 ntBASIC14.91□□□□□ -0.02
HES4Q9HCC6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HES4Q9HCC6 CHCHD2P8-201ENST00000429873 447 ntBASIC14.91□□□□□ -0.02
HES4Q9HCC6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HES4Q9HCC6 BX276092.5-203ENST00000456199 560 ntBASIC14.91□□□□□ -0.02
HES4Q9HCC6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HES4Q9HCC6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.91□□□□□ -0.02
HES4Q9HCC6 AC087388.1-201ENST00000571370 1112 ntBASIC14.91□□□□□ -0.02
HES4Q9HCC6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.91□□□□□ -0.02
HES4Q9HCC6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.91□□□□□ -0.02
HES4Q9HCC6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms