Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 AC012313.1-201ENST00000593393 3059 ntBASIC16.36■□□□□ 0.21
UBQLN3Q9H347 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 NSUN5P1-202ENST00000421140 1535 ntBASIC16.35■□□□□ 0.21
UBQLN3Q9H347 NSUN5P2-203ENST00000457352 1529 ntBASIC16.35■□□□□ 0.21
UBQLN3Q9H347 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 TSPY19P-201ENST00000418461 509 ntBASIC16.35■□□□□ 0.21
UBQLN3Q9H347 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 TSPY18P-201ENST00000441642 509 ntBASIC16.35■□□□□ 0.21
UBQLN3Q9H347 MTCL1P1-201ENST00000446207 792 ntBASIC16.35■□□□□ 0.21
UBQLN3Q9H347 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBQLN3Q9H347 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN3Q9H347 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.33■□□□□ 0.21
UBQLN3Q9H347 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.33■□□□□ 0.21
UBQLN3Q9H347 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
UBQLN3Q9H347 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBQLN3Q9H347 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBQLN3Q9H347 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBQLN3Q9H347 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
UBQLN3Q9H347 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.33■□□□□ 0.21
UBQLN3Q9H347 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBQLN3Q9H347 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBQLN3Q9H347 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBQLN3Q9H347 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms