Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 MIR3917-201ENST00000580971 93 ntBASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.61■□□□□ 0.09
COMMD4Q9H0A8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 MIR1238-201ENST00000408483 83 ntBASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 AL390955.1-201ENST00000428694 934 ntBASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 PVRIG2P-201ENST00000435460 978 ntBASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 AC009947.2-201ENST00000444014 672 ntBASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 AP006294.2-201ENST00000641667 209 ntBASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.6■□□□□ 0.09
COMMD4Q9H0A8 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 TSPY14P-201ENST00000303979 915 ntBASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 TSPY7P-201ENST00000431358 1114 ntBASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 AC113404.2-201ENST00000507884 177 ntBASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
COMMD4Q9H0A8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms