Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
RPAP1Q9BWH6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RPAP1Q9BWH6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RPAP1Q9BWH6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RPAP1Q9BWH6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RPAP1Q9BWH6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RPAP1Q9BWH6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 IGHV3-22-201ENST00000520721 359 ntBASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 AC021087.4-201ENST00000563761 564 ntBASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 KRT8P47-201ENST00000604727 1398 ntBASIC21.38■■□□□ 1.01
RPAP1Q9BWH6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 AC096633.1-201ENST00000422446 749 ntBASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 RPL13AP23-201ENST00000480739 586 ntBASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 POLD2P1-201ENST00000511220 997 ntBASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RPAP1Q9BWH6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 RPS2P28-201ENST00000314255 741 ntBASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 CD63-204ENST00000546939 779 ntTSL 3 BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 AC116407.3-201ENST00000623905 1129 ntBASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 ZNF259P1-201ENST00000407656 1365 ntBASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 BX842568.4-201ENST00000421222 227 ntBASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 AC025062.2-201ENST00000605477 670 ntBASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.36■■□□□ 1.01
RPAP1Q9BWH6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
RPAP1Q9BWH6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms