Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 RN7SL606P-201ENST00000472779 293 ntBASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 LINC01711-201ENST00000598340 967 ntBASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 AL121772.3-201ENST00000610840 674 ntBASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCGF1Q9BSM1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 TPM4P1-201ENST00000436100 807 ntBASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 AC111152.3-201ENST00000569699 673 ntBASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCGF1Q9BSM1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 AC091304.2-201ENST00000564639 760 ntBASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 AC084018.2-201ENST00000613093 2607 ntBASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF1Q9BSM1 FLJ13224-201ENST00000313737 1514 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms