Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC11.74□□□□□ -0.53
LITAFQ99732 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
LITAFQ99732 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC11.74□□□□□ -0.53
LITAFQ99732 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
LITAFQ99732 BUB3-202ENST00000368859 667 ntTSL 3 BASIC11.74□□□□□ -0.53
LITAFQ99732 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 METTL15-202ENST00000403099 795 ntTSL 5 BASIC11.74□□□□□ -0.53
LITAFQ99732 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
LITAFQ99732 AC097658.1-201ENST00000475555 843 ntBASIC11.74□□□□□ -0.53
LITAFQ99732 AC009065.1-201ENST00000564055 1225 ntBASIC11.74□□□□□ -0.53
LITAFQ99732 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC11.74□□□□□ -0.53
LITAFQ99732 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC11.74□□□□□ -0.53
LITAFQ99732 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 AC011298.2-201ENST00000617989 482 ntBASIC11.74□□□□□ -0.53
LITAFQ99732 ABBA01031674.1-201ENST00000635145 728 ntBASIC11.74□□□□□ -0.53
LITAFQ99732 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
LITAFQ99732 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC11.74□□□□□ -0.53
LITAFQ99732 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC11.74□□□□□ -0.53
LITAFQ99732 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC11.74□□□□□ -0.53
LITAFQ99732 MBP-202ENST00000355994 2772 ntTSL 5 BASIC11.74□□□□□ -0.53
LITAFQ99732 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC11.74□□□□□ -0.53
LITAFQ99732 LINC00167-201ENST00000530583 1419 ntBASIC11.74□□□□□ -0.53
LITAFQ99732 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
LITAFQ99732 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC11.74□□□□□ -0.53
LITAFQ99732 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
LITAFQ99732 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
LITAFQ99732 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
LITAFQ99732 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC11.73□□□□□ -0.53
LITAFQ99732 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LITAFQ99732 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LITAFQ99732 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LITAFQ99732 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
LITAFQ99732 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
LITAFQ99732 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LITAFQ99732 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LITAFQ99732 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LITAFQ99732 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LITAFQ99732 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
LITAFQ99732 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
LITAFQ99732 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC11.73□□□□□ -0.53
LITAFQ99732 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC11.73□□□□□ -0.53
LITAFQ99732 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LITAFQ99732 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
LITAFQ99732 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
LITAFQ99732 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LITAFQ99732 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
LITAFQ99732 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LITAFQ99732 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC11.73□□□□□ -0.53
LITAFQ99732 NIFKP9-201ENST00000419265 221 ntBASIC11.73□□□□□ -0.53
LITAFQ99732 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LITAFQ99732 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LITAFQ99732 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
LITAFQ99732 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC11.73□□□□□ -0.53
LITAFQ99732 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
LITAFQ99732 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC11.73□□□□□ -0.53
LITAFQ99732 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC11.73□□□□□ -0.53
LITAFQ99732 KRT8P7-201ENST00000533003 1432 ntBASIC11.73□□□□□ -0.53
LITAFQ99732 TK2-208ENST00000545043 1120 ntTSL 2 BASIC11.73□□□□□ -0.53
LITAFQ99732 AC126177.1-201ENST00000547829 2218 ntBASIC11.73□□□□□ -0.53
LITAFQ99732 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LITAFQ99732 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
LITAFQ99732 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC11.73□□□□□ -0.53
LITAFQ99732 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
LITAFQ99732 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC11.73□□□□□ -0.53
LITAFQ99732 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LITAFQ99732 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LITAFQ99732 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LITAFQ99732 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
LITAFQ99732 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LITAFQ99732 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LITAFQ99732 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
LITAFQ99732 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LITAFQ99732 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms