Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.32■■□□□ 1
EYA3Q99504 AC100803.2-201ENST00000562459 1963 ntBASIC21.32■■□□□ 1
EYA3Q99504 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
EYA3Q99504 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.32■■□□□ 1
EYA3Q99504 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
EYA3Q99504 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.32■■□□□ 1
EYA3Q99504 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.31■■□□□ 1
EYA3Q99504 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EYA3Q99504 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC21.31■■□□□ 1
EYA3Q99504 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
EYA3Q99504 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EYA3Q99504 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
EYA3Q99504 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC21.31■■□□□ 1
EYA3Q99504 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.31■■□□□ 1
EYA3Q99504 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
EYA3Q99504 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
EYA3Q99504 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EYA3Q99504 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
EYA3Q99504 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC21.31■■□□□ 1
EYA3Q99504 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC21.31■■□□□ 1
EYA3Q99504 AC023141.13-201ENST00000604991 943 ntBASIC21.31■■□□□ 1
EYA3Q99504 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC21.31■■□□□ 1
EYA3Q99504 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
EYA3Q99504 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.31■■□□□ 1
EYA3Q99504 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.31■■□□□ 1
EYA3Q99504 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
EYA3Q99504 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EYA3Q99504 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
EYA3Q99504 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.31■■□□□ 1
EYA3Q99504 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
EYA3Q99504 AC025580.3-201ENST00000617932 1424 ntBASIC21.3■■□□□ 1
EYA3Q99504 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EYA3Q99504 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.3■■□□□ 1
EYA3Q99504 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.3■■□□□ 1
EYA3Q99504 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
EYA3Q99504 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.3■■□□□ 1
EYA3Q99504 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.3■■□□□ 1
EYA3Q99504 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC21.3■■□□□ 1
EYA3Q99504 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EYA3Q99504 FAM58CP-201ENST00000435741 640 ntBASIC21.3■■□□□ 1
EYA3Q99504 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EYA3Q99504 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EYA3Q99504 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC21.3■■□□□ 1
EYA3Q99504 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC21.3■■□□□ 1
EYA3Q99504 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC21.3■■□□□ 1
EYA3Q99504 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC21.3■■□□□ 1
EYA3Q99504 MIR3197-201ENST00000582241 73 ntBASIC21.3■■□□□ 1
EYA3Q99504 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC21.3■■□□□ 1
EYA3Q99504 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC21.3■■□□□ 1
EYA3Q99504 ORC5-208ENST00000626700 344 ntTSL 3 BASIC21.3■■□□□ 1
EYA3Q99504 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.3■■□□□ 1
EYA3Q99504 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EYA3Q99504 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
EYA3Q99504 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC21.3■■□□□ 1
EYA3Q99504 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.3■■□□□ 1
EYA3Q99504 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
EYA3Q99504 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EYA3Q99504 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC21.29■■□□□ 1
EYA3Q99504 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.29■■□□□ 1
EYA3Q99504 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.29■■□□□ 1
EYA3Q99504 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EYA3Q99504 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
EYA3Q99504 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
EYA3Q99504 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.29■■□□□ 1
EYA3Q99504 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.29■■□□□ 1
EYA3Q99504 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
EYA3Q99504 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EYA3Q99504 NEK7-201ENST00000367383 586 ntTSL 2 BASIC21.29■■□□□ 1
EYA3Q99504 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EYA3Q99504 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC21.29■■□□□ 1
EYA3Q99504 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC21.29■■□□□ 1
EYA3Q99504 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC21.29■■□□□ 1
EYA3Q99504 AP000344.2-201ENST00000512987 629 ntBASIC21.29■■□□□ 1
EYA3Q99504 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC21.29■■□□□ 1
EYA3Q99504 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
EYA3Q99504 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.29■■□□□ 1
EYA3Q99504 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC21.29■■□□□ 1
EYA3Q99504 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.29■■□□□ 1
EYA3Q99504 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC21.29■■□□□ 1
EYA3Q99504 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
EYA3Q99504 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EYA3Q99504 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
EYA3Q99504 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
EYA3Q99504 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EYA3Q99504 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
EYA3Q99504 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21.29■■□□□ 1
EYA3Q99504 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.29■■□□□ 1
EYA3Q99504 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.29■■□□□ 1
EYA3Q99504 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC21.29■■□□□ 1
EYA3Q99504 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.28■■□□□ 1
EYA3Q99504 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.28■■□□□ 1
EYA3Q99504 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.28■■□□□ 1
EYA3Q99504 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EYA3Q99504 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.28■■□□□ 1
EYA3Q99504 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EYA3Q99504 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EYA3Q99504 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC21.28■■□□□ 1
EYA3Q99504 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EYA3Q99504 DDT-204ENST00000404092 805 ntTSL 3 BASIC21.28■■□□□ 1
EYA3Q99504 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms