Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDK5RAP1Q96SZ6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CDK5RAP1Q96SZ6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5RAP1Q96SZ6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.29■□□□□ 0.52
CDK5RAP1Q96SZ6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.29■□□□□ 0.52
CDK5RAP1Q96SZ6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CDK5RAP1Q96SZ6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5RAP1Q96SZ6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.29■□□□□ 0.52
CDK5RAP1Q96SZ6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDK5RAP1Q96SZ6 STK19B-204ENST00000512515 211 ntBASIC18.29■□□□□ 0.52
CDK5RAP1Q96SZ6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5RAP1Q96SZ6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.29■□□□□ 0.52
CDK5RAP1Q96SZ6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5RAP1Q96SZ6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CDK5RAP1Q96SZ6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5RAP1Q96SZ6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CDK5RAP1Q96SZ6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5RAP1Q96SZ6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDK5RAP1Q96SZ6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.29■□□□□ 0.52
CDK5RAP1Q96SZ6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.29■□□□□ 0.52
CDK5RAP1Q96SZ6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5RAP1Q96SZ6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5RAP1Q96SZ6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CDK5RAP1Q96SZ6 HTR7P1-202ENST00000624664 4411 ntBASIC18.29■□□□□ 0.52
CDK5RAP1Q96SZ6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 LAGE3P1-201ENST00000425356 484 ntBASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 OR7E14P-202ENST00000530490 1290 ntBASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 AC025062.2-201ENST00000605477 670 ntBASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP1Q96SZ6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 BX005266.1-201ENST00000473402 457 ntBASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 FAM215A-202ENST00000632077 792 ntBASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 AL390961.4-201ENST00000623958 2535 ntBASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP1Q96SZ6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDK5RAP1Q96SZ6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDK5RAP1Q96SZ6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDK5RAP1Q96SZ6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms