Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 KRT43P-201ENST00000434019 910 ntBASIC5.3□□□□□ -1.56
HMCN1Q96RW7 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 RERG-205ENST00000537647 935 ntTSL 2 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 MIR4750-201ENST00000584564 56 ntBASIC5.3□□□□□ -1.56
HMCN1Q96RW7 AC007431.3-201ENST00000623221 587 ntBASIC5.3□□□□□ -1.56
HMCN1Q96RW7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 TSACC-208ENST00000481479 741 ntTSL 2 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 USP32P1-208ENST00000506594 1164 ntBASIC5.3□□□□□ -1.56
HMCN1Q96RW7 KRT18P41-201ENST00000518924 1277 ntBASIC5.3□□□□□ -1.56
HMCN1Q96RW7 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 EIF5AP2-201ENST00000585668 1047 ntBASIC5.3□□□□□ -1.56
HMCN1Q96RW7 AC009542.2-202ENST00000619004 1067 ntBASIC5.3□□□□□ -1.56
HMCN1Q96RW7 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMCN1Q96RW7 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 SPDYE19P-201ENST00000338590 713 ntBASIC5.29□□□□□ -1.56
HMCN1Q96RW7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 KLF2P4-201ENST00000451959 1225 ntBASIC5.29□□□□□ -1.56
HMCN1Q96RW7 ALG1L8P-201ENST00000533887 760 ntBASIC5.29□□□□□ -1.56
HMCN1Q96RW7 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 AC093677.2-201ENST00000600169 1863 ntBASIC5.29□□□□□ -1.56
HMCN1Q96RW7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 SLC7A15P-201ENST00000424028 1363 ntBASIC5.29□□□□□ -1.56
HMCN1Q96RW7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 AKAP8P1-201ENST00000434743 1349 ntBASIC5.29□□□□□ -1.56
HMCN1Q96RW7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 AC005229.1-201ENST00000392885 409 ntBASIC5.29□□□□□ -1.56
HMCN1Q96RW7 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 RPL13AP19-201ENST00000434320 584 ntBASIC5.29□□□□□ -1.56
HMCN1Q96RW7 AC140658.5-201ENST00000438532 169 ntBASIC5.29□□□□□ -1.56
HMCN1Q96RW7 AC006033.1-201ENST00000440505 426 ntBASIC5.29□□□□□ -1.56
HMCN1Q96RW7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 AL844908.2-201ENST00000609461 460 ntBASIC5.29□□□□□ -1.56
HMCN1Q96RW7 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HMCN1Q96RW7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms