Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNX18Q96RF0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNX18Q96RF0 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SNX18Q96RF0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNX18Q96RF0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNX18Q96RF0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.11■□□□□ 0.17
SNX18Q96RF0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.11■□□□□ 0.17
SNX18Q96RF0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SNX18Q96RF0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SNX18Q96RF0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNX18Q96RF0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNX18Q96RF0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.11■□□□□ 0.17
SNX18Q96RF0 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SNX18Q96RF0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNX18Q96RF0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNX18Q96RF0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNX18Q96RF0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.11■□□□□ 0.17
SNX18Q96RF0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNX18Q96RF0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
SNX18Q96RF0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.11■□□□□ 0.17
SNX18Q96RF0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.11■□□□□ 0.17
SNX18Q96RF0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.11■□□□□ 0.17
SNX18Q96RF0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SNX18Q96RF0 AC006011.2-201ENST00000621313 1158 ntBASIC16.11■□□□□ 0.17
SNX18Q96RF0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SNX18Q96RF0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.11■□□□□ 0.17
SNX18Q96RF0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.11■□□□□ 0.17
SNX18Q96RF0 AC099343.3-201ENST00000605834 2503 ntBASIC16.11■□□□□ 0.17
SNX18Q96RF0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNX18Q96RF0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNX18Q96RF0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.11■□□□□ 0.17
SNX18Q96RF0 AC132938.6-201ENST00000623828 1655 ntBASIC16.11■□□□□ 0.17
SNX18Q96RF0 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SNX18Q96RF0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SNX18Q96RF0 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNX18Q96RF0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
SNX18Q96RF0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNX18Q96RF0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNX18Q96RF0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.1■□□□□ 0.17
SNX18Q96RF0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNX18Q96RF0 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNX18Q96RF0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
SNX18Q96RF0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SNX18Q96RF0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.1■□□□□ 0.17
SNX18Q96RF0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SNX18Q96RF0 UBALD1-205ENST00000590891 2641 ntBASIC16.1■□□□□ 0.17
SNX18Q96RF0 AC068418.2-201ENST00000577309 3703 ntBASIC16.1■□□□□ 0.17
SNX18Q96RF0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.1■□□□□ 0.17
SNX18Q96RF0 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNX18Q96RF0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.1■□□□□ 0.17
SNX18Q96RF0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.1■□□□□ 0.17
SNX18Q96RF0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.1■□□□□ 0.17
SNX18Q96RF0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.1■□□□□ 0.17
SNX18Q96RF0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.1■□□□□ 0.17
SNX18Q96RF0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SNX18Q96RF0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNX18Q96RF0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNX18Q96RF0 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SNX18Q96RF0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SNX18Q96RF0 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNX18Q96RF0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
SNX18Q96RF0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.1■□□□□ 0.17
SNX18Q96RF0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNX18Q96RF0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.1■□□□□ 0.17
SNX18Q96RF0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.1■□□□□ 0.17
SNX18Q96RF0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
SNX18Q96RF0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNX18Q96RF0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SNX18Q96RF0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SNX18Q96RF0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.1■□□□□ 0.17
SNX18Q96RF0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SNX18Q96RF0 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNX18Q96RF0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNX18Q96RF0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNX18Q96RF0 KRT89P-201ENST00000620027 1478 ntBASIC16.1■□□□□ 0.17
SNX18Q96RF0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SNX18Q96RF0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SNX18Q96RF0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SNX18Q96RF0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNX18Q96RF0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNX18Q96RF0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SNX18Q96RF0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.09■□□□□ 0.17
SNX18Q96RF0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNX18Q96RF0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNX18Q96RF0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
SNX18Q96RF0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.09■□□□□ 0.17
SNX18Q96RF0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.09■□□□□ 0.17
SNX18Q96RF0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNX18Q96RF0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SNX18Q96RF0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNX18Q96RF0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SNX18Q96RF0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SNX18Q96RF0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.09■□□□□ 0.17
SNX18Q96RF0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.09■□□□□ 0.17
SNX18Q96RF0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.09■□□□□ 0.17
SNX18Q96RF0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.09■□□□□ 0.17
SNX18Q96RF0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SNX18Q96RF0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SNX18Q96RF0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.09■□□□□ 0.17
SNX18Q96RF0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms