Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.54■□□□□ 0.56
SMARCD1Q96GM5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCD1Q96GM5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
SMARCD1Q96GM5 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCD1Q96GM5 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 HTR7P1-202ENST00000624664 4411 ntBASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 BX005266.1-201ENST00000473402 457 ntBASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 AL022326.1-202ENST00000641533 845 ntBASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCD1Q96GM5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 LINC00304-203ENST00000565008 1864 ntBASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 STK19B-204ENST00000512515 211 ntBASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.52■□□□□ 0.56
SMARCD1Q96GM5 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMARCD1Q96GM5 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMARCD1Q96GM5 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMARCD1Q96GM5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMARCD1Q96GM5 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMARCD1Q96GM5 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMARCD1Q96GM5 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMARCD1Q96GM5 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SMARCD1Q96GM5 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 MTDHP4-201ENST00000600287 670 ntBASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 AC025062.2-201ENST00000605477 670 ntBASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 AC148477.8-201ENST00000624298 468 ntBASIC18.51■□□□□ 0.55
SMARCD1Q96GM5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 230.9 ms