Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SH3KBP1Q96B97 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SH3KBP1Q96B97 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
SH3KBP1Q96B97 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.5■□□□□ 0.39
SH3KBP1Q96B97 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SH3KBP1Q96B97 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SH3KBP1Q96B97 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.5■□□□□ 0.39
SH3KBP1Q96B97 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SH3KBP1Q96B97 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 NFIC-211ENST00000641145 8399 ntBASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 EMBP1-201ENST00000458200 901 ntBASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 AC008764.6-201ENST00000595909 2069 ntBASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SH3KBP1Q96B97 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 AL591684.3-201ENST00000605187 298 ntBASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SH3KBP1Q96B97 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 AC022898.2-201ENST00000616822 1312 ntBASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 AC096582.2-201ENST00000510860 516 ntBASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 MIR5100-201ENST00000579544 119 ntBASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 BNIP3P18-201ENST00000593976 575 ntBASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 AC114341.1-201ENST00000618070 349 ntBASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SH3KBP1Q96B97 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms