Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CNOT9Q92600 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNOT9Q92600 AC009053.2-201ENST00000563701 2365 ntBASIC16.27■□□□□ 0.2
CNOT9Q92600 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CNOT9Q92600 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.27■□□□□ 0.2
CNOT9Q92600 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.27■□□□□ 0.2
CNOT9Q92600 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CNOT9Q92600 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CNOT9Q92600 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.27■□□□□ 0.2
CNOT9Q92600 RN7SL606P-201ENST00000472779 293 ntBASIC16.27■□□□□ 0.2
CNOT9Q92600 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CNOT9Q92600 GUSBP12-201ENST00000513727 720 ntBASIC16.27■□□□□ 0.2
CNOT9Q92600 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNOT9Q92600 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CNOT9Q92600 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CNOT9Q92600 AL121956.5-201ENST00000625261 221 ntBASIC16.27■□□□□ 0.2
CNOT9Q92600 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.27■□□□□ 0.2
CNOT9Q92600 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNOT9Q92600 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CNOT9Q92600 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CNOT9Q92600 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CNOT9Q92600 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CNOT9Q92600 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CNOT9Q92600 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CNOT9Q92600 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.27■□□□□ 0.19
CNOT9Q92600 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CNOT9Q92600 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CNOT9Q92600 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CNOT9Q92600 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
CNOT9Q92600 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CNOT9Q92600 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CNOT9Q92600 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT9Q92600 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT9Q92600 AL138688.1-201ENST00000624851 1594 ntBASIC16.26■□□□□ 0.19
CNOT9Q92600 BX276092.7-203ENST00000637198 1536 ntBASIC16.26■□□□□ 0.19
CNOT9Q92600 AC108860.2-201ENST00000562760 2183 ntBASIC16.26■□□□□ 0.19
CNOT9Q92600 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT9Q92600 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT9Q92600 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT9Q92600 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT9Q92600 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.26■□□□□ 0.19
CNOT9Q92600 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.26■□□□□ 0.19
CNOT9Q92600 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.26■□□□□ 0.19
CNOT9Q92600 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.26■□□□□ 0.19
CNOT9Q92600 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
CNOT9Q92600 AC124864.1-201ENST00000623408 392 ntBASIC16.26■□□□□ 0.19
CNOT9Q92600 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.26■□□□□ 0.19
CNOT9Q92600 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT9Q92600 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT9Q92600 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT9Q92600 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.26■□□□□ 0.19
CNOT9Q92600 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.26■□□□□ 0.19
CNOT9Q92600 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT9Q92600 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.26■□□□□ 0.19
CNOT9Q92600 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.26■□□□□ 0.19
CNOT9Q92600 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.26■□□□□ 0.19
CNOT9Q92600 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT9Q92600 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT9Q92600 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.26■□□□□ 0.19
CNOT9Q92600 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CNOT9Q92600 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNOT9Q92600 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.25■□□□□ 0.19
CNOT9Q92600 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT9Q92600 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.25■□□□□ 0.19
CNOT9Q92600 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT9Q92600 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT9Q92600 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.25■□□□□ 0.19
CNOT9Q92600 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT9Q92600 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.25■□□□□ 0.19
CNOT9Q92600 AC005332.1-201ENST00000577698 1310 ntBASIC16.25■□□□□ 0.19
CNOT9Q92600 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT9Q92600 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT9Q92600 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT9Q92600 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT9Q92600 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.25■□□□□ 0.19
CNOT9Q92600 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT9Q92600 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CNOT9Q92600 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT9Q92600 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT9Q92600 AC096633.1-201ENST00000422446 749 ntBASIC16.25■□□□□ 0.19
CNOT9Q92600 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.25■□□□□ 0.19
CNOT9Q92600 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.25■□□□□ 0.19
CNOT9Q92600 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.25■□□□□ 0.19
CNOT9Q92600 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.25■□□□□ 0.19
CNOT9Q92600 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.25■□□□□ 0.19
CNOT9Q92600 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
CNOT9Q92600 AL592071.1-201ENST00000611956 408 ntBASIC16.25■□□□□ 0.19
CNOT9Q92600 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.25■□□□□ 0.19
CNOT9Q92600 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.25■□□□□ 0.19
CNOT9Q92600 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.25■□□□□ 0.19
CNOT9Q92600 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT9Q92600 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CNOT9Q92600 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT9Q92600 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT9Q92600 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT9Q92600 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT9Q92600 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.25■□□□□ 0.19
CNOT9Q92600 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CNOT9Q92600 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CNOT9Q92600 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms