Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCC2Q8TAQ2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCC2Q8TAQ2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCC2Q8TAQ2 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCC2Q8TAQ2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCC2Q8TAQ2 AC246785.2-201ENST00000432512 513 ntBASIC20.65■□□□□ 0.9
SMARCC2Q8TAQ2 NUS1P1-201ENST00000446295 882 ntBASIC20.65■□□□□ 0.9
SMARCC2Q8TAQ2 AC091607.1-201ENST00000490318 1060 ntBASIC20.65■□□□□ 0.9
SMARCC2Q8TAQ2 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.65■□□□□ 0.9
SMARCC2Q8TAQ2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.65■□□□□ 0.9
SMARCC2Q8TAQ2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCC2Q8TAQ2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.65■□□□□ 0.9
SMARCC2Q8TAQ2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCC2Q8TAQ2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SMARCC2Q8TAQ2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCC2Q8TAQ2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SMARCC2Q8TAQ2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMARCC2Q8TAQ2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SMARCC2Q8TAQ2 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMARCC2Q8TAQ2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMARCC2Q8TAQ2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMARCC2Q8TAQ2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SMARCC2Q8TAQ2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SMARCC2Q8TAQ2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.64■□□□□ 0.89
SMARCC2Q8TAQ2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCC2Q8TAQ2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCC2Q8TAQ2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCC2Q8TAQ2 AL450487.1-201ENST00000426799 995 ntBASIC20.64■□□□□ 0.89
SMARCC2Q8TAQ2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.64■□□□□ 0.89
SMARCC2Q8TAQ2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.64■□□□□ 0.89
SMARCC2Q8TAQ2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCC2Q8TAQ2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCC2Q8TAQ2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCC2Q8TAQ2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SMARCC2Q8TAQ2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.64■□□□□ 0.89
SMARCC2Q8TAQ2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCC2Q8TAQ2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCC2Q8TAQ2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCC2Q8TAQ2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCC2Q8TAQ2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.64■□□□□ 0.89
SMARCC2Q8TAQ2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 AC097374.2-201ENST00000618617 1306 ntBASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 AP005901.3-202ENST00000581653 237 ntBASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 AL353801.3-201ENST00000609898 542 ntBASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 AC080080.1-201ENST00000625121 2420 ntBASIC20.63■□□□□ 0.89
SMARCC2Q8TAQ2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 AP001094.4-201ENST00000579008 2176 ntBASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 IGHV3-47-201ENST00000425060 335 ntBASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 MINOS1P3-201ENST00000457048 203 ntBASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 FOSL1P1-201ENST00000511041 816 ntBASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 AC099336.1-202ENST00000602961 463 ntBASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCC2Q8TAQ2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms