Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
SYNE1Q8NF91 BX842568.4-201ENST00000421222 227 ntBASIC5.46□□□□□ -1.53
SYNE1Q8NF91 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.53
SYNE1Q8NF91 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC5.46□□□□□ -1.53
SYNE1Q8NF91 AC068587.9-201ENST00000641814 219 ntBASIC5.46□□□□□ -1.53
SYNE1Q8NF91 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
SYNE1Q8NF91 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
SYNE1Q8NF91 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SYNE1Q8NF91 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SYNE1Q8NF91 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC5.46□□□□□ -1.53
SYNE1Q8NF91 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SYNE1Q8NF91 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.53
SYNE1Q8NF91 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SYNE1Q8NF91 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC5.46□□□□□ -1.53
SYNE1Q8NF91 MED22-202ENST00000371999 987 ntTSL 3 BASIC5.46□□□□□ -1.53
SYNE1Q8NF91 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
SYNE1Q8NF91 AC005104.2-201ENST00000427818 678 ntBASIC5.46□□□□□ -1.53
SYNE1Q8NF91 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC5.46□□□□□ -1.53
SYNE1Q8NF91 RNPS1P1-201ENST00000507437 918 ntBASIC5.46□□□□□ -1.53
SYNE1Q8NF91 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SYNE1Q8NF91 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SYNE1Q8NF91 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
SYNE1Q8NF91 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
SYNE1Q8NF91 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC5.46□□□□□ -1.53
SYNE1Q8NF91 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SYNE1Q8NF91 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SYNE1Q8NF91 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC5.46□□□□□ -1.53
SYNE1Q8NF91 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
SYNE1Q8NF91 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SYNE1Q8NF91 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 IGHV3-22-201ENST00000520721 359 ntBASIC5.46□□□□□ -1.54
SYNE1Q8NF91 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 RPP21-221ENST00000428040 594 ntTSL 2 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 FUOM-202ENST00000368551 628 ntTSL 3 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 AC011840.4-201ENST00000578471 627 ntBASIC5.46□□□□□ -1.54
SYNE1Q8NF91 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 CYP51A1P1-201ENST00000492267 1507 ntBASIC5.46□□□□□ -1.54
SYNE1Q8NF91 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 AL138831.2-201ENST00000606564 490 ntBASIC5.46□□□□□ -1.54
SYNE1Q8NF91 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms