Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KLHDC9Q8NEP7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KLHDC9Q8NEP7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 AL513480.1-201ENST00000451731 511 ntBASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 AC112191.1-201ENST00000523689 701 ntBASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 AC015911.4-201ENST00000588022 1070 ntBASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 AC135776.1-201ENST00000319817 2481 ntBASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KLHDC9Q8NEP7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KLHDC9Q8NEP7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.28■□□□□ 0.68
KLHDC9Q8NEP7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
KLHDC9Q8NEP7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
KLHDC9Q8NEP7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KLHDC9Q8NEP7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
KLHDC9Q8NEP7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.28■□□□□ 0.68
KLHDC9Q8NEP7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KLHDC9Q8NEP7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KLHDC9Q8NEP7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.28■□□□□ 0.68
KLHDC9Q8NEP7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.28■□□□□ 0.68
KLHDC9Q8NEP7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.28■□□□□ 0.68
KLHDC9Q8NEP7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.28■□□□□ 0.68
KLHDC9Q8NEP7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KLHDC9Q8NEP7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.28■□□□□ 0.68
KLHDC9Q8NEP7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.28■□□□□ 0.68
KLHDC9Q8NEP7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.28■□□□□ 0.68
KLHDC9Q8NEP7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KLHDC9Q8NEP7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KLHDC9Q8NEP7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KLHDC9Q8NEP7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KLHDC9Q8NEP7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KLHDC9Q8NEP7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
KLHDC9Q8NEP7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
KLHDC9Q8NEP7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
KLHDC9Q8NEP7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
KLHDC9Q8NEP7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.27■□□□□ 0.68
KLHDC9Q8NEP7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms