Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.95■□□□□ 0.46
CHPFQ8IZ52 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHPFQ8IZ52 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHPFQ8IZ52 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 AL356488.2-201ENST00000602755 427 ntBASIC17.94■□□□□ 0.46
CHPFQ8IZ52 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 MIR1199-201ENST00000621445 119 ntBASIC17.94■□□□□ 0.46
CHPFQ8IZ52 AC073592.4-201ENST00000623827 446 ntBASIC17.94■□□□□ 0.46
CHPFQ8IZ52 AC073592.5-201ENST00000624854 528 ntBASIC17.94■□□□□ 0.46
CHPFQ8IZ52 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 SIRPAP1-201ENST00000448467 1770 ntBASIC17.94■□□□□ 0.46
CHPFQ8IZ52 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHPFQ8IZ52 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 AL354751.1-201ENST00000412768 1863 ntBASIC17.93■□□□□ 0.46
CHPFQ8IZ52 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 SPDYE21P-201ENST00000413323 827 ntBASIC17.93■□□□□ 0.46
CHPFQ8IZ52 UNC93B6-202ENST00000528242 690 ntBASIC17.93■□□□□ 0.46
CHPFQ8IZ52 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.93■□□□□ 0.46
CHPFQ8IZ52 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 AL133373.2-201ENST00000623187 2828 ntBASIC17.93■□□□□ 0.46
CHPFQ8IZ52 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHPFQ8IZ52 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHPFQ8IZ52 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CHPFQ8IZ52 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHPFQ8IZ52 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.92■□□□□ 0.46
CHPFQ8IZ52 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHPFQ8IZ52 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHPFQ8IZ52 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHPFQ8IZ52 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHPFQ8IZ52 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHPFQ8IZ52 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHPFQ8IZ52 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHPFQ8IZ52 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHPFQ8IZ52 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
CHPFQ8IZ52 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHPFQ8IZ52 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHPFQ8IZ52 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
CHPFQ8IZ52 KRT18P3-201ENST00000451602 1288 ntBASIC17.92■□□□□ 0.46
CHPFQ8IZ52 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
CHPFQ8IZ52 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
CHPFQ8IZ52 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.92■□□□□ 0.46
CHPFQ8IZ52 AC006557.2-201ENST00000592985 1240 ntBASIC17.92■□□□□ 0.46
CHPFQ8IZ52 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms