Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 RCN1P2-201ENST00000398357 915 ntBASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 FOSL1P1-201ENST00000511041 816 ntBASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB11FIP4Q86YS3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 TP73-AS1-210ENST00000637775 1455 ntBASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 AC139713.2-201ENST00000641328 2723 ntBASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 DDX43P3-201ENST00000441064 443 ntBASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.69■□□□□ 0.9
RAB11FIP4Q86YS3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 AC012615.1-201ENST00000565797 1299 ntBASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB11FIP4Q86YS3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB11FIP4Q86YS3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.67■□□□□ 0.9
RAB11FIP4Q86YS3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB11FIP4Q86YS3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB11FIP4Q86YS3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.67■□□□□ 0.9
RAB11FIP4Q86YS3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB11FIP4Q86YS3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB11FIP4Q86YS3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.67■□□□□ 0.9
RAB11FIP4Q86YS3 KRT18P56-201ENST00000507275 550 ntBASIC20.67■□□□□ 0.9
RAB11FIP4Q86YS3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.67■□□□□ 0.9
RAB11FIP4Q86YS3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms