Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC25Q86WR0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CCDC25Q86WR0 AC018695.7-201ENST00000624587 2492 ntBASIC18.25■□□□□ 0.51
CCDC25Q86WR0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC25Q86WR0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC25Q86WR0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
CCDC25Q86WR0 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC25Q86WR0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.24■□□□□ 0.51
CCDC25Q86WR0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 UNC93B2-201ENST00000285383 730 ntBASIC18.24■□□□□ 0.51
CCDC25Q86WR0 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 AL390955.1-201ENST00000428694 934 ntBASIC18.24■□□□□ 0.51
CCDC25Q86WR0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 AC007663.1-201ENST00000438948 1240 ntBASIC18.24■□□□□ 0.51
CCDC25Q86WR0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 AC116562.4-202ENST00000641738 218 ntBASIC18.24■□□□□ 0.51
CCDC25Q86WR0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC25Q86WR0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 PRORSD1P-201ENST00000295112 541 ntBASIC18.23■□□□□ 0.51
CCDC25Q86WR0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 RBM17P1-201ENST00000453646 1190 ntBASIC18.23■□□□□ 0.51
CCDC25Q86WR0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 SEC1P-202ENST00000473944 940 ntBASIC18.23■□□□□ 0.51
CCDC25Q86WR0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC25Q86WR0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 UBE2SP1-201ENST00000450587 669 ntBASIC18.22■□□□□ 0.51
CCDC25Q86WR0 TSPY20P-201ENST00000450910 630 ntBASIC18.22■□□□□ 0.51
CCDC25Q86WR0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 AP000525.1-201ENST00000608286 694 ntBASIC18.22■□□□□ 0.51
CCDC25Q86WR0 LINC01451-201ENST00000623792 534 ntBASIC18.22■□□□□ 0.51
CCDC25Q86WR0 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms