Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC10.79□□□□□ -0.68
VPS13BQ7Z7G8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 OR8S1-201ENST00000310194 1080 ntBASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 RPL30-202ENST00000396070 440 ntTSL 2 BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 AC236430.1-201ENST00000402231 743 ntBASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 AC055876.3-201ENST00000431496 288 ntBASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 AC004835.2-201ENST00000603762 682 ntBASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 AC138649.4-201ENST00000612222 287 ntBASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 AC087289.5-201ENST00000586076 3175 ntBASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 AP002414.1-201ENST00000391405 1147 ntBASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 RPS15P9-201ENST00000494093 319 ntBASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 AC008667.4-201ENST00000607370 168 ntBASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 AL353593.2-201ENST00000602529 1483 ntBASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 FAM207CP-201ENST00000443486 507 ntBASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 RNA5SP421-201ENST00000516864 134 ntBASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 AC009093.7-201ENST00000623853 1223 ntBASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 AC025048.6-201ENST00000634326 1161 ntBASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VPS13BQ7Z7G8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
VPS13BQ7Z7G8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.68
VPS13BQ7Z7G8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
VPS13BQ7Z7G8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
VPS13BQ7Z7G8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
VPS13BQ7Z7G8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
VPS13BQ7Z7G8 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
VPS13BQ7Z7G8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC10.77□□□□□ -0.68
VPS13BQ7Z7G8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC10.77□□□□□ -0.68
VPS13BQ7Z7G8 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC10.77□□□□□ -0.68
VPS13BQ7Z7G8 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC10.77□□□□□ -0.68
VPS13BQ7Z7G8 ARSEP1-201ENST00000420443 635 ntBASIC10.77□□□□□ -0.68
VPS13BQ7Z7G8 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
VPS13BQ7Z7G8 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC10.77□□□□□ -0.68
VPS13BQ7Z7G8 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC10.77□□□□□ -0.68
VPS13BQ7Z7G8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC10.77□□□□□ -0.68
VPS13BQ7Z7G8 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC10.77□□□□□ -0.68
VPS13BQ7Z7G8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
VPS13BQ7Z7G8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
VPS13BQ7Z7G8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.68
VPS13BQ7Z7G8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS13BQ7Z7G8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS13BQ7Z7G8 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC10.77□□□□□ -0.69
VPS13BQ7Z7G8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC10.77□□□□□ -0.69
VPS13BQ7Z7G8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC10.77□□□□□ -0.69
VPS13BQ7Z7G8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
VPS13BQ7Z7G8 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC10.77□□□□□ -0.69
VPS13BQ7Z7G8 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC10.77□□□□□ -0.69
VPS13BQ7Z7G8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC10.77□□□□□ -0.69
VPS13BQ7Z7G8 AC025580.3-201ENST00000617932 1424 ntBASIC10.77□□□□□ -0.69
VPS13BQ7Z7G8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
VPS13BQ7Z7G8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS13BQ7Z7G8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
VPS13BQ7Z7G8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC10.77□□□□□ -0.69
VPS13BQ7Z7G8 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS13BQ7Z7G8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS13BQ7Z7G8 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
VPS13BQ7Z7G8 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC10.77□□□□□ -0.69
VPS13BQ7Z7G8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC10.77□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms